Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 AC118658.2-201ENST00000618697 459 ntBASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 AL138820.1-201ENST00000617901 5305 ntBASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 AC090971.4-201ENST00000560291 1800 ntBASIC5.37□□□□□ -1.55
PPARGC1AQ9UBK2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 RNA5SP223-201ENST00000365174 120 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 RNU6-1103P-201ENST00000384150 107 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 MIR600-201ENST00000385007 98 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 CCNG1P1-201ENST00000406783 885 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 CTSL3P-202ENST00000412179 788 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AL139413.1-201ENST00000421309 217 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 NPM1P24-201ENST00000428039 894 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AL662791.1-201ENST00000441992 928 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 RPS26P56-201ENST00000444468 240 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC004980.3-201ENST00000447046 365 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 BX842559.2-201ENST00000451418 605 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 ELOCP23-201ENST00000452014 332 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC023598.1-201ENST00000472521 361 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC006499.3-201ENST00000506077 748 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC010493.1-201ENST00000513479 292 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC100784.1-201ENST00000522790 310 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC022832.1-201ENST00000530718 645 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC008127.2-201ENST00000549925 1075 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AL157687.1-201ENST00000554853 619 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 HMGB1P33-201ENST00000563485 527 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 DUXAP4-201ENST00000603046 613 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC008277.2-201ENST00000605196 797 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC091965.4-201ENST00000607691 587 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC009704.2-201ENST00000618739 483 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 FER-202ENST00000438717 1531 ntTSL 2 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC114546.3-201ENST00000623582 1734 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 AC114947.2-201ENST00000565748 2125 ntBASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PPARGC1AQ9UBK2 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 AL118496.1-201ENST00000440201 1812 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 SNORA72.1-201ENST00000363485 129 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RNU6-694P-201ENST00000364071 147 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 RNU6-777P-201ENST00000364265 104 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 MIR1178-201ENST00000408396 91 ntBASIC5.35□□□□□ -1.55
PPARGC1AQ9UBK2 PIGFP2-201ENST00000421400 651 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms