Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 BBIP1P1-201ENST00000602999 279 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC010624.4-201ENST00000597606 1351 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 KPNA2P1-201ENST00000458289 1591 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AL031119.1-201ENST00000404707 1879 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AC005618.1-201ENST00000606901 3148 ntBASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.25□□□□□ -1.41
CUEDC1Q9NWM3 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC133552.1-201ENST00000569988 4007 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 MTND5P7-201ENST00000413558 1798 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.180-201ENST00000363867 113 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-746P-201ENST00000384112 109 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 PRELID1P1-201ENST00000403549 660 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AL078604.1-201ENST00000404609 466 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 CYCSP52-201ENST00000422857 310 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 PDSS1P1-201ENST00000422953 1114 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RSL24D1P6-201ENST00000426934 401 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RPL12P16-201ENST00000431098 498 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC003989.1-201ENST00000434569 565 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AL645939.3-201ENST00000435408 225 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RNU7-180P-201ENST00000459240 63 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC026410.2-201ENST00000460281 156 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC058823.1-201ENST00000485315 474 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC018645.1-201ENST00000505003 109 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-475P-201ENST00000516073 104 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 SCARNA21.2-201ENST00000516600 166 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-1213P-201ENST00000517075 94 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC073581.1-201ENST00000519036 575 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC023043.2-201ENST00000589678 1026 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC097467.4-201ENST00000605504 141 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 RN7SL261P-201ENST00000613441 282 ntBASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.24□□□□□ -1.41
CUEDC1Q9NWM3 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL353796.1-201ENST00000561542 3241 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 LINC01613-201ENST00000561476 2780 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 RNU6-490P-201ENST00000362985 107 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.785-201ENST00000384290 109 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 Y_RNA.512-201ENST00000384518 102 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 RNA5SP431-201ENST00000410312 120 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AL137014.1-201ENST00000420490 1226 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AC139712.2-201ENST00000424302 339 ntBASIC6.23□□□□□ -1.41
CUEDC1Q9NWM3 AC234779.1-201ENST00000425910 285 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms