Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 HNRNPKP5-201ENST00000515300 253 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RNU2-30P-201ENST00000516209 141 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RNU6-759P-201ENST00000516740 103 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 PTP4A1P6-201ENST00000531034 478 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 HMGB3P26-201ENST00000560051 582 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 GTF2IP8-201ENST00000560687 584 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC069061.3-201ENST00000582254 823 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 MIR3939-201ENST00000582614 106 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 HMGB2P1-201ENST00000591146 634 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 VN1R85P-201ENST00000601587 426 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AL590229.1-201ENST00000603497 542 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AP003117.2-201ENST00000606010 545 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC023043.4-201ENST00000612081 449 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC024941.1-201ENST00000612250 334 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC068722.2-201ENST00000618734 544 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AC116618.1-201ENST00000634617 774 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 AL136164.3-201ENST00000624429 3978 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.8□□□□□ -1.64
VPS45Q9NRW7 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
VPS45Q9NRW7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 OR4A15-201ENST00000314706 1035 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 RNU1-83P-201ENST00000363426 164 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 RNA5SP509-201ENST00000364577 119 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 MIR506-201ENST00000384998 124 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 ENSAP1-201ENST00000392855 326 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AL133264.1-201ENST00000407157 562 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AL591848.1-201ENST00000413092 322 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 FCF1P2-201ENST00000415284 583 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 RPS15AP40-201ENST00000419621 391 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 UQCRBP1-201ENST00000421129 336 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 RPEP3-201ENST00000425462 676 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 OR4F13P-201ENST00000428478 931 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 RPS27AP12-201ENST00000429552 465 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 THAP5P1-201ENST00000439089 262 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 MTCO2P7-201ENST00000446518 666 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AL445669.2-201ENST00000454425 421 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 MTND4LP3-201ENST00000468320 276 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 RPL21P103-201ENST00000479921 488 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 RN7SL604P-201ENST00000492589 296 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 OR2A20P-203ENST00000498397 1268 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 RNA5SP360-201ENST00000516555 118 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 RN7SKP234-201ENST00000517173 224 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 CYCSP28-201ENST00000534284 321 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 MIR4458-201ENST00000578872 75 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC010738.1-201ENST00000604970 987 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 MIR92B-201ENST00000607575 96 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC069209.1-201ENST00000619282 651 ntBASIC4.79□□□□□ -1.64
VPS45Q9NRW7 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
VPS45Q9NRW7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms