Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 MIR6798-201ENST00000612887 67 ntBASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 AC011476.5-201ENST00000615594 130 ntBASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 AL591926.1-201ENST00000620542 217 ntBASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 AC008785.1-201ENST00000624475 456 ntBASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 MBL2-201ENST00000373968 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SCAF1Q9H7N4 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 RNU4-84P-201ENST00000364200 139 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 SMIM11P1-201ENST00000369586 178 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 RNY3P4-201ENST00000384428 101 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AL513475.1-201ENST00000406602 315 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 RNA5SP115-201ENST00000411160 107 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 TRBV26-201ENST00000456572 344 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 RN7SL325P-201ENST00000460434 283 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 RPL23AP8-201ENST00000479812 475 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AP001025.1-201ENST00000486139 332 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AC023818.1-201ENST00000498379 384 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AC022296.2-201ENST00000512424 202 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 Y_RNA.694-201ENST00000516677 117 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 RN7SKP96-201ENST00000516948 297 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AC087369.1-201ENST00000520775 996 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 UBE2Q2P11-201ENST00000559691 205 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 MIR3154-201ENST00000577829 84 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AC007566.2-201ENST00000603642 413 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AL022394.1-201ENST00000606979 292 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 SHQ1P1-201ENST00000437111 1544 ntBASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
SCAF1Q9H7N4 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
SCAF1Q9H7N4 AL137003.2-201ENST00000606924 2538 ntBASIC10.65□□□□□ -0.71
SCAF1Q9H7N4 OR7E25P-202ENST00000641088 5937 ntBASIC10.65□□□□□ -0.71
SCAF1Q9H7N4 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
SCAF1Q9H7N4 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.71
SCAF1Q9H7N4 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 AC112255.1-201ENST00000624070 2493 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 FCGR3A-201ENST00000367967 2086 ntAPPRIS P1 TSL 3 BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 SNORA25.1-201ENST00000362326 128 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 RNU6-1289P-201ENST00000384431 106 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 HSPA8P15-201ENST00000401676 786 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 EI24P4-201ENST00000423683 1078 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 PUDPP2-201ENST00000431423 643 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 GCNT1P5-201ENST00000449274 682 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 AC234782.3-201ENST00000461229 433 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 TOMM20P1-201ENST00000534518 427 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 AC073349.3-201ENST00000617616 186 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 PPP1R1C-202ENST00000409137 3004 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 ZMYND8-211ENST00000446994 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 HYDIN2-203ENST00000614586 13885 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 CTNND1-231ENST00000532463 5749 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 AL357556.1-201ENST00000421884 1388 ntBASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
SCAF1Q9H7N4 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms