Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 AP004217.1-201ENST00000480579 346 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AC108064.1-201ENST00000513791 460 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 RN7SKP141-201ENST00000516167 338 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 OR8L1P-201ENST00000534005 955 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AC051619.2-201ENST00000559063 397 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AL162713.1-201ENST00000604480 262 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AC015802.5-201ENST00000607478 399 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AL021707.7-201ENST00000607991 416 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AL391834.1-201ENST00000609609 560 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AL390240.1-201ENST00000612950 384 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 MIR6875-201ENST00000617506 72 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 AL392088.2-201ENST00000637607 285 ntBASIC2.59□□□□□ -1.99
SMIM3Q9BZL3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC2.59□□□□□ -2
SMIM3Q9BZL3 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC2.59□□□□□ -2
SMIM3Q9BZL3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.59□□□□□ -2
SMIM3Q9BZL3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
SMIM3Q9BZL3 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2.59□□□□□ -2
SMIM3Q9BZL3 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 RNU6-532P-201ENST00000384318 107 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AC007066.1-201ENST00000392902 381 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 RPS4XP9-201ENST00000405151 780 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AL031121.1-201ENST00000406553 254 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 RNA5SP229-201ENST00000410809 99 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 CRYBB2P1-203ENST00000415709 538 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SMIM3Q9BZL3 AC241520.1-201ENST00000422654 1099 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 VDAC1P3-201ENST00000434069 851 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMIM3Q9BZL3 RPL21P89-201ENST00000444021 467 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 RPS20P21-201ENST00000466859 343 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 HMGN2P13-201ENST00000476476 274 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AC025518.1-201ENST00000479856 347 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 RPL23AP55-201ENST00000498163 452 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 ATG10-AS1-201ENST00000504846 648 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AC090071.1-201ENST00000507713 644 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.58□□□□□ -2
SMIM3Q9BZL3 HMGN1P11-201ENST00000508668 303 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AC110792.2-201ENST00000510278 224 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AC093755.1-201ENST00000512950 1023 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 AGGF1P6-201ENST00000569213 976 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 AC090616.5-202ENST00000582111 297 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 MLECP1-201ENST00000615893 709 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 AC119674.1-212ENST00000641155 993 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SMIM3Q9BZL3 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 HSPA8P19-201ENST00000505359 1517 ntBASIC2.58□□□□□ -2
SMIM3Q9BZL3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMIM3Q9BZL3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMIM3Q9BZL3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.57□□□□□ -2
SMIM3Q9BZL3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMIM3Q9BZL3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
SMIM3Q9BZL3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
SMIM3Q9BZL3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMIM3Q9BZL3 RNA5SP283-201ENST00000365604 119 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 U8.9-201ENST00000365667 134 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMIM3Q9BZL3 RNU2-71P-201ENST00000411395 189 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 ATP5A1P2-201ENST00000412323 255 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 AC244098.2-201ENST00000422068 99 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.57□□□□□ -2
SMIM3Q9BZL3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC2.57□□□□□ -2
SMIM3Q9BZL3 AC023347.2-201ENST00000433994 462 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 ELOCP11-201ENST00000436690 332 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 YWHAZP7-201ENST00000436906 631 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 ELOCP16-201ENST00000444494 332 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 OR2AF1P-201ENST00000454899 889 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC2.57□□□□□ -2
SMIM3Q9BZL3 RN7SL610P-201ENST00000463845 291 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 AC007686.1-201ENST00000488511 463 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.57□□□□□ -2
SMIM3Q9BZL3 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.57□□□□□ -2
SMIM3Q9BZL3 FCF1P8-201ENST00000510322 597 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 RN7SKP43-201ENST00000516173 320 ntBASIC2.57□□□□□ -2
SMIM3Q9BZL3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.57□□□□□ -2
SMIM3Q9BZL3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.57□□□□□ -2
SMIM3Q9BZL3 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms