Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC100778.3-201ENST00000580060 1750 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 RNA5SP238-201ENST00000365464 120 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU6-326P-201ENST00000365480 107 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 SNORA12.2-201ENST00000391040 156 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 RNU4ATAC2P-201ENST00000408674 126 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 IGLC6-201ENST00000410078 317 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 Y_RNA.629-201ENST00000411368 105 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AL121916.1-201ENST00000429405 308 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC016712.1-201ENST00000431088 378 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 ELOCP18-201ENST00000434209 337 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC01732-201ENST00000435023 542 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 PRDX1P1-201ENST00000449329 596 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 PSPC1P2-201ENST00000455130 225 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 HSPE1P25-201ENST00000455484 251 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AP001324.2-201ENST00000461163 319 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SL251P-201ENST00000464175 297 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 RN7SL702P-201ENST00000488394 292 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 MIR892C-201ENST00000516410 77 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 IGLV10-67-201ENST00000519446 325 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 RAB9BP1-201ENST00000519581 626 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 CYP4A26P-201ENST00000563017 196 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC104581.2-201ENST00000572227 430 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AP000915.2-201ENST00000582120 454 ntTSL 3 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC00663-205ENST00000589508 432 ntTSL 3 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 OR5AH1P-201ENST00000595968 283 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC123786.2-201ENST00000603459 275 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 Metazoa_SRP.124-201ENST00000610352 345 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC108706.1-201ENST00000611053 297 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AL356599.1-202ENST00000626919 218 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC099654.15-201ENST00000639802 509 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 USP46-202ENST00000451218 4622 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 TTTY15-202ENST00000440408 5284 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 GUCY1B2-204ENST00000531898 1979 ntBASIC3.62□□□□□ -1.83
KRTAP3-1Q9BYR8 AC008725.1-201ENST00000605123 2263 ntBASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 AL606537.1-201ENST00000607258 2011 ntBASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 KCNN3-201ENST00000271915 13033 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 PRO1804-201ENST00000623780 2050 ntBASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 AC110716.2-201ENST00000563865 3945 ntBASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 BTK-209ENST00000618050 2417 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 AL034546.1-201ENST00000623740 3693 ntBASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC3.61□□□□□ -1.83
KRTAP3-1Q9BYR8 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms