Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 TRBV8-2-201ENST00000475637 270 ntBASIC5□□□□□ -1.61
IFT140Q96RY7 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5□□□□□ -1.61
IFT140Q96RY7 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5□□□□□ -1.61
IFT140Q96RY7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5□□□□□ -1.61
IFT140Q96RY7 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5□□□□□ -1.61
IFT140Q96RY7 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5□□□□□ -1.61
IFT140Q96RY7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC5□□□□□ -1.61
IFT140Q96RY7 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
IFT140Q96RY7 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC5□□□□□ -1.61
IFT140Q96RY7 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
IFT140Q96RY7 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
IFT140Q96RY7 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
IFT140Q96RY7 AL353692.2-201ENST00000407054 335 ntBASIC5□□□□□ -1.61
IFT140Q96RY7 YWHAEP5-201ENST00000431545 765 ntBASIC5□□□□□ -1.61
IFT140Q96RY7 AC111000.2-201ENST00000507775 550 ntBASIC5□□□□□ -1.61
IFT140Q96RY7 SCARNA20.6-201ENST00000517251 106 ntBASIC5□□□□□ -1.61
IFT140Q96RY7 AL121576.1-201ENST00000556055 276 ntBASIC5□□□□□ -1.61
IFT140Q96RY7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5□□□□□ -1.61
IFT140Q96RY7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5□□□□□ -1.61
IFT140Q96RY7 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5□□□□□ -1.61
IFT140Q96RY7 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
IFT140Q96RY7 AC018555.1-201ENST00000567548 1980 ntBASIC4.99□□□□□ -1.61
IFT140Q96RY7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
IFT140Q96RY7 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 SEPT7P2-202ENST00000398921 823 ntBASIC4.99□□□□□ -1.61
IFT140Q96RY7 AL136116.1-201ENST00000403591 381 ntBASIC4.99□□□□□ -1.61
IFT140Q96RY7 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
IFT140Q96RY7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 AC096947.1-201ENST00000603233 470 ntBASIC4.99□□□□□ -1.61
IFT140Q96RY7 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
IFT140Q96RY7 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
IFT140Q96RY7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
IFT140Q96RY7 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 CR381670.1-201ENST00000624291 1693 ntBASIC4.98□□□□□ -1.61
IFT140Q96RY7 MIR184-201ENST00000384962 84 ntBASIC4.98□□□□□ -1.61
IFT140Q96RY7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 MRPS31P2-201ENST00000451581 518 ntBASIC4.98□□□□□ -1.61
IFT140Q96RY7 RPL31P13-201ENST00000484151 370 ntBASIC4.98□□□□□ -1.61
IFT140Q96RY7 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 AC064859.1-201ENST00000624741 174 ntBASIC4.98□□□□□ -1.61
IFT140Q96RY7 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
IFT140Q96RY7 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
IFT140Q96RY7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.97□□□□□ -1.61
IFT140Q96RY7 SNORA9.2-201ENST00000365361 133 ntBASIC4.97□□□□□ -1.61
IFT140Q96RY7 AC233981.1-201ENST00000423224 461 ntBASIC4.97□□□□□ -1.61
IFT140Q96RY7 NPM1P24-201ENST00000428039 894 ntBASIC4.97□□□□□ -1.61
IFT140Q96RY7 RPS6P2-201ENST00000454208 705 ntBASIC4.97□□□□□ -1.61
IFT140Q96RY7 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.97□□□□□ -1.61
IFT140Q96RY7 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.97□□□□□ -1.61
IFT140Q96RY7 MAPK10-373ENST00000641983 6772 ntBASIC4.96□□□□□ -1.61
IFT140Q96RY7 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
IFT140Q96RY7 MIR9-1-201ENST00000385198 89 ntBASIC4.96□□□□□ -1.62
IFT140Q96RY7 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.96□□□□□ -1.62
IFT140Q96RY7 ARL5AP4-201ENST00000430731 512 ntBASIC4.96□□□□□ -1.62
IFT140Q96RY7 FTH1P6-201ENST00000430768 320 ntBASIC4.96□□□□□ -1.62
IFT140Q96RY7 AL589765.3-201ENST00000446084 462 ntBASIC4.96□□□□□ -1.62
IFT140Q96RY7 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC4.96□□□□□ -1.62
IFT140Q96RY7 OR5G4P-201ENST00000525251 760 ntBASIC4.96□□□□□ -1.62
IFT140Q96RY7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.96□□□□□ -1.62
IFT140Q96RY7 AC103858.2-201ENST00000621471 543 ntBASIC4.96□□□□□ -1.62
IFT140Q96RY7 MIR4727-201ENST00000622232 55 ntBASIC4.96□□□□□ -1.62
IFT140Q96RY7 MTCO1P22-201ENST00000604619 1360 ntBASIC4.96□□□□□ -1.62
IFT140Q96RY7 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
IFT140Q96RY7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
IFT140Q96RY7 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
IFT140Q96RY7 KPNA2P2-201ENST00000419546 1489 ntBASIC4.95□□□□□ -1.62
IFT140Q96RY7 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
IFT140Q96RY7 AL592148.1-201ENST00000413568 445 ntBASIC4.95□□□□□ -1.62
IFT140Q96RY7 AL445528.1-201ENST00000426330 420 ntBASIC4.95□□□□□ -1.62
IFT140Q96RY7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
IFT140Q96RY7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.95□□□□□ -1.62
IFT140Q96RY7 AC113430.1-201ENST00000506872 718 ntBASIC4.95□□□□□ -1.62
IFT140Q96RY7 EEF1A1P37-201ENST00000522748 715 ntBASIC4.95□□□□□ -1.62
IFT140Q96RY7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.95□□□□□ -1.62
IFT140Q96RY7 AC006840.1-201ENST00000623069 542 ntBASIC4.95□□□□□ -1.62
IFT140Q96RY7 AC063923.1-201ENST00000478982 1619 ntBASIC4.95□□□□□ -1.62
IFT140Q96RY7 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
IFT140Q96RY7 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.95□□□□□ -1.62
IFT140Q96RY7 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.95□□□□□ -1.62
IFT140Q96RY7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC4.95□□□□□ -1.62
IFT140Q96RY7 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
IFT140Q96RY7 SMC4P1-201ENST00000414479 527 ntBASIC4.94□□□□□ -1.62
IFT140Q96RY7 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.94□□□□□ -1.62
IFT140Q96RY7 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.94□□□□□ -1.62
IFT140Q96RY7 AC010307.1-201ENST00000467206 836 ntBASIC4.94□□□□□ -1.62
IFT140Q96RY7 RPS20P22-201ENST00000473700 357 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms