Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-628P-201ENST00000410675 107 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 CRYBB2P1-203ENST00000415709 538 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 HSFY6P-201ENST00000445573 403 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AL157884.3-201ENST00000448273 1184 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC008571.1-201ENST00000467232 300 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 HMGN2P13-201ENST00000476476 274 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 APOOP4-201ENST00000513530 597 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 MIR2116-201ENST00000517221 80 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 CENPUP2-201ENST00000555897 1186 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC008745.1-201ENST00000604064 271 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC090912.3-201ENST00000609775 533 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC006023.2-201ENST00000609916 167 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 AC112200.1-201ENST00000625015 234 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.51□□□□□ -2.01
AP1S3Q96PC3 THUMPD3P1-201ENST00000506556 1480 ntBASIC2.51□□□□□ -2.01
AP1S3Q96PC3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AC116096.1-201ENST00000566804 2314 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 FRG1CP-201ENST00000358464 769 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 RNU1-32P-201ENST00000363937 159 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AL590290.1-201ENST00000405336 380 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 TOMM22P1-201ENST00000418578 312 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 CKS1BP5-201ENST00000434172 273 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 RPL21P2-201ENST00000440049 481 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 RSL24D1P2-201ENST00000445584 366 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AC093392.2-201ENST00000450682 337 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 TPMTP4-201ENST00000450749 678 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 NECAP1P2-201ENST00000455668 727 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 NF1P3-201ENST00000457709 450 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 RPS26P21-201ENST00000475397 348 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 VN1R105P-201ENST00000486595 910 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 HMGN1P11-201ENST00000508668 303 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AF279873.1-201ENST00000523393 313 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 MTCYBP41-201ENST00000528913 1123 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AC090616.5-202ENST00000582111 297 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 YWHAQP7-201ENST00000603536 658 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 RNU1-30P-201ENST00000606575 163 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AL391497.1-201ENST00000608671 547 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AL445423.1-201ENST00000609941 536 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 MIR7641-1-201ENST00000627518 61 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AC073476.4-201ENST00000628409 72 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 AC026951.1-201ENST00000559530 2459 ntBASIC2.5□□□□□ -2.01
AP1S3Q96PC3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
AP1S3Q96PC3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 RNU1-13P-201ENST00000384499 162 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 SNORA26.7-201ENST00000391288 122 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 TANK-203ENST00000402568 878 ntTSL 5 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 RSL24D1P1-201ENST00000404972 493 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 Z99755.1-201ENST00000414048 380 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 AC012065.2-201ENST00000421295 375 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 TRIM60P9Y-201ENST00000438459 816 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 CEACAMP9-201ENST00000442990 513 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 TRIM60P11Y-201ENST00000445313 801 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 TPT1P13-201ENST00000449760 499 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 AL590639.1-201ENST00000456484 337 ntBASIC2.49□□□□□ -2.01
AP1S3Q96PC3 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.49□□□□□ -2.01
AP1S3Q96PC3 RN7SL132P-201ENST00000478131 296 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms