Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS50Q96JG6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC092650.2-201ENST00000619984 902 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC000123.2-201ENST00000623124 461 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AL356266.1-201ENST00000623311 483 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 AC090582.1-201ENST00000636321 199 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
VPS50Q96JG6 OR5BR1P-201ENST00000524992 1330 ntBASIC4.64□□□□□ -1.67
VPS50Q96JG6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
VPS50Q96JG6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
VPS50Q96JG6 MAPK10-303ENST00000641324 3959 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC012020.1-201ENST00000624541 1728 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 RNU1-20P-201ENST00000363314 162 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 Y_RNA.302-201ENST00000364997 102 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 SNORA70.10-201ENST00000384515 134 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC006366.1-201ENST00000422002 759 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 MTCO1P19-201ENST00000443487 500 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC063943.1-201ENST00000465434 453 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 RN7SL41P-201ENST00000476144 297 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 RPS4XP18-201ENST00000495480 763 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 SNX5P1-201ENST00000505757 1041 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 VWA8P1-201ENST00000510889 176 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 MTND3P5-201ENST00000512798 333 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 MTCYBP43-201ENST00000513621 740 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC022447.1-201ENST00000515358 464 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC012414.6-201ENST00000568241 401 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 ELOCP28-201ENST00000590044 317 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 AC020914.6-201ENST00000594327 272 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 VN1R92P-201ENST00000598511 928 ntBASIC4.63□□□□□ -1.67
VPS50Q96JG6 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
VPS50Q96JG6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.63□□□□□ -1.67
VPS50Q96JG6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 SNRPEP3-201ENST00000338402 276 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 RNU6-433P-201ENST00000363216 104 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 RNU6-444P-201ENST00000383988 108 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 Y_RNA.553-201ENST00000384670 102 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 RNA5SP113-201ENST00000410486 84 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 RPS15AP38-201ENST00000413110 372 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AL031779.1-201ENST00000415663 330 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AL590139.1-201ENST00000416267 400 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 MTCYBP38-201ENST00000417160 1123 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 RWDD4P2-201ENST00000426392 563 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 MTND1P30-201ENST00000441241 901 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 TRIM60P18-201ENST00000441518 828 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.62□□□□□ -1.67
VPS50Q96JG6 SCARNA10-201ENST00000459255 330 ntBASIC4.62□□□□□ -1.67
VPS50Q96JG6 RPS17P2-201ENST00000461663 408 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 253.2 ms