Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RNU2-21P-201ENST00000410368 188 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC019070.1-201ENST00000415008 1024 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC008173.1-201ENST00000418901 264 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.42□□□□□ -1.86
ITCHQ96J02 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 KCTD10P1-201ENST00000434203 625 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 AL138799.3-201ENST00000438968 350 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 RPL21P89-201ENST00000444021 467 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 CYCSP20-201ENST00000473154 315 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC104689.1-201ENST00000473356 768 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC084357.1-201ENST00000473404 255 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.42□□□□□ -1.86
ITCHQ96J02 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.42□□□□□ -1.86
ITCHQ96J02 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.42□□□□□ -1.86
ITCHQ96J02 NIPA2P2-201ENST00000496376 1083 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AL139099.1-201ENST00000497398 403 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC010460.1-201ENST00000507087 466 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.42□□□□□ -1.86
ITCHQ96J02 RNU6-1231P-201ENST00000517185 103 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.42□□□□□ -1.86
ITCHQ96J02 AP003049.1-201ENST00000529418 457 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ITCHQ96J02 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 ATP5F1P7-201ENST00000567330 760 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 MIR3160-1-201ENST00000577972 85 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.42□□□□□ -1.86
ITCHQ96J02 MIR5187-201ENST00000583479 76 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.42□□□□□ -1.86
ITCHQ96J02 AC092474.3-201ENST00000603022 568 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AL365503.1-201ENST00000605247 905 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 RNA5SP108-201ENST00000605921 117 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AL392048.1-201ENST00000613946 534 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 AC121761.2-201ENST00000617300 689 ntBASIC3.42□□□□□ -1.86
ITCHQ96J02 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ITCHQ96J02 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ITCHQ96J02 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ITCHQ96J02 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
ITCHQ96J02 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
ITCHQ96J02 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
ITCHQ96J02 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
ITCHQ96J02 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
ITCHQ96J02 SNORD6-201ENST00000365444 73 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 SNORA70E-201ENST00000384492 135 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 RNU1-13P-201ENST00000384499 162 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.41□□□□□ -1.86
ITCHQ96J02 MTND4P22-201ENST00000413116 1169 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 AC068533.1-201ENST00000418542 415 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 AL159169.1-201ENST00000421119 127 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 SDCBPP2-201ENST00000424643 885 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.41□□□□□ -1.86
ITCHQ96J02 MTCO1P43-201ENST00000431831 488 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.41□□□□□ -1.86
ITCHQ96J02 HSFY6P-201ENST00000445573 403 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.41□□□□□ -1.86
ITCHQ96J02 RPL5P23-201ENST00000496040 868 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.41□□□□□ -1.86
ITCHQ96J02 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.41□□□□□ -1.86
ITCHQ96J02 AP006245.1-201ENST00000522549 120 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.41□□□□□ -1.86
ITCHQ96J02 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ITCHQ96J02 AP000916.1-201ENST00000533869 835 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.41□□□□□ -1.86
ITCHQ96J02 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ITCHQ96J02 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ITCHQ96J02 RNU1-30P-201ENST00000606575 163 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 AC096586.1-201ENST00000610267 561 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ITCHQ96J02 MIR8084-201ENST00000614105 89 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ITCHQ96J02 AC006213.5-201ENST00000619673 288 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ITCHQ96J02 AP003400.6-201ENST00000624698 740 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.41□□□□□ -1.86
ITCHQ96J02 AL590396.2-201ENST00000636511 1041 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.41□□□□□ -1.86
ITCHQ96J02 AC132825.7-201ENST00000638744 335 ntBASIC3.41□□□□□ -1.86
ITCHQ96J02 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ITCHQ96J02 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ITCHQ96J02 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ITCHQ96J02 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
ITCHQ96J02 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.41□□□□□ -1.86
ITCHQ96J02 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ITCHQ96J02 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.41□□□□□ -1.86
ITCHQ96J02 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.41□□□□□ -1.86
ITCHQ96J02 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.4□□□□□ -1.86
ITCHQ96J02 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
ITCHQ96J02 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ITCHQ96J02 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ITCHQ96J02 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms