Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AL391219.1-201ENST00000422570 483 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 USP12PY-201ENST00000427677 1064 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 NPM1P49-201ENST00000448027 714 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 RPL5P24-201ENST00000463742 885 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC026414.1-201ENST00000504046 698 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 C1GALT1P3-201ENST00000522049 819 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC118942.1-201ENST00000529674 1035 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 OR5D17P-201ENST00000531492 978 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 GNRHR2P1-201ENST00000555315 631 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AL606834.3-201ENST00000602615 496 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC103858.2-201ENST00000621471 543 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AF001550.2-201ENST00000636643 217 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 AC139713.2-210ENST00000641741 992 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 FAM35DP-201ENST00000323387 2712 ntBASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
PDLIM5Q96HC4 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RNU5E-10P-201ENST00000363506 118 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RNU6-335P-201ENST00000364563 113 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RPL7P27-201ENST00000403775 720 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AL023807.1-201ENST00000407932 359 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RNU2-37P-201ENST00000410695 177 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 HSPE1P12-201ENST00000412576 301 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 TPT1P2-201ENST00000413105 503 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 KCTD9P3-201ENST00000434597 1169 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RPS7P2-201ENST00000435134 607 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC083863.1-201ENST00000438811 231 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RPS4XP4-201ENST00000443195 763 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 VN1R25P-201ENST00000443385 738 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC004022.1-201ENST00000447766 1066 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 OFD1P3Y-201ENST00000453312 783 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 VN1R40P-201ENST00000455196 941 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RPL9P32-201ENST00000464118 620 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC010301.1-201ENST00000473936 355 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RPL31P13-201ENST00000484151 370 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC109471.1-201ENST00000511631 612 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 RNA5SP135-201ENST00000517019 125 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC091516.1-201ENST00000549191 703 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AL451044.1-201ENST00000604867 238 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC063944.3-201ENST00000609969 533 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AL512506.2-201ENST00000624472 458 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 AC048347.1-201ENST00000624621 427 ntBASIC3.95□□□□□ -1.78
PDLIM5Q96HC4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 130.3 ms