Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 MIR5047-201ENST00000579212 100 ntBASIC4.48□□□□□ -1.69
CDC42BPAQ5VT25 AC007566.2-201ENST00000603642 413 ntBASIC4.48□□□□□ -1.69
CDC42BPAQ5VT25 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDC42BPAQ5VT25 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDC42BPAQ5VT25 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDC42BPAQ5VT25 AC017002.4-201ENST00000604721 1525 ntBASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 BMS1P22-201ENST00000414726 313 ntBASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 NPM1P24-201ENST00000428039 894 ntBASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 RPS3P1-201ENST00000456781 192 ntBASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 RPS17P11-201ENST00000474297 293 ntBASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 RPL12P22-201ENST00000519073 490 ntBASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 ASNSP1-201ENST00000518311 1939 ntBASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDC42BPAQ5VT25 AC110754.1-201ENST00000399740 601 ntBASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 RN7SKP284-201ENST00000411002 343 ntBASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 HMGN1P18-201ENST00000457642 277 ntBASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 RPS27AP1-201ENST00000475545 471 ntBASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 AC021146.1-201ENST00000511202 716 ntBASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 AC067852.4-201ENST00000590314 478 ntBASIC4.46□□□□□ -1.69
CDC42BPAQ5VT25 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
CDC42BPAQ5VT25 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CDC42BPAQ5VT25 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CDC42BPAQ5VT25 RPL23AP48-201ENST00000406913 488 ntBASIC4.46□□□□□ -1.7
CDC42BPAQ5VT25 SLC31A1P1-201ENST00000451221 567 ntBASIC4.46□□□□□ -1.7
CDC42BPAQ5VT25 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.46□□□□□ -1.7
CDC42BPAQ5VT25 RN7SKP272-201ENST00000516988 232 ntBASIC4.46□□□□□ -1.7
CDC42BPAQ5VT25 AC015911.5-201ENST00000587076 451 ntBASIC4.46□□□□□ -1.7
CDC42BPAQ5VT25 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CDC42BPAQ5VT25 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 RNU6-851P-201ENST00000384565 107 ntBASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 MIR9-1-201ENST00000385198 89 ntBASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 SNORD109B-201ENST00000458961 67 ntBASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 SNORD109A-201ENST00000459128 67 ntBASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 AL049844.2-201ENST00000604280 628 ntBASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 AC007318.2-201ENST00000620999 243 ntBASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CDC42BPAQ5VT25 MTND5P24-201ENST00000438892 1767 ntBASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 RPL7P26-201ENST00000333817 754 ntBASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 RPL30P2-201ENST00000414021 291 ntBASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 RPS26P40-201ENST00000435209 294 ntBASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 AL049874.4-201ENST00000557593 255 ntBASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 AL096803.3-201ENST00000609032 532 ntBASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CDC42BPAQ5VT25 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 MIR708-201ENST00000390708 88 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 RNU2-52P-201ENST00000410680 190 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 FAR1P1-201ENST00000427163 934 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 RPL21P40-201ENST00000428586 483 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 KRTAP19-11P-201ENST00000439851 104 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 RNU1-41P-201ENST00000516161 162 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 RNU1-48P-201ENST00000516400 162 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 AC234778.2-201ENST00000566241 354 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 RPL23AP92-201ENST00000603609 255 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 RNU1-112P-201ENST00000364401 164 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 AL356057.1-202ENST00000402263 756 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 AL138878.1-201ENST00000405131 347 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 RPL7L1P1-201ENST00000448259 785 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 AC114967.1-201ENST00000504890 259 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 AC103783.1-201ENST00000520506 373 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 OR4C2P-201ENST00000530855 1064 ntBASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDC42BPAQ5VT25 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms