Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 SNORA70B-201ENST00000384210 135 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 RPL23AP48-201ENST00000406913 488 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC009487.4-201ENST00000624969 3585 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 RNU1-89P-201ENST00000384592 164 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 SNORD15B-201ENST00000384714 146 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 RSL24D1P4-201ENST00000400938 484 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 SNRPGP5-201ENST00000456003 220 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC090543.2-201ENST00000483963 348 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 AP001207.2-201ENST00000519490 539 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC107016.2-201ENST00000547968 190 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 SNORD53-201ENST00000579969 78 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 AC138761.3-201ENST00000579993 334 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 U7.8-201ENST00000619968 63 ntBASIC2□□□□□ -2.09
VPS13DQ5THJ4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
VPS13DQ5THJ4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC2□□□□□ -2.09
VPS13DQ5THJ4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 RNA5SP21-201ENST00000410917 96 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AC007563.3-201ENST00000433233 371 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 snoU13.15-201ENST00000459407 104 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AL034351.1-201ENST00000605288 668 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AC078899.5-201ENST00000612475 178 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AC010300.1-201ENST00000600671 5134 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 U3.6-201ENST00000363622 211 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 HSD52-202ENST00000436225 772 ntTSL 3 BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 RPS17P11-201ENST00000474297 293 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 SERPINE4P-201ENST00000554978 281 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 RNU6-851P-201ENST00000384565 107 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AC233981.1-201ENST00000423224 461 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AL035407.1-201ENST00000429211 571 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 AC009039.2-201ENST00000624524 529 ntBASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
VPS13DQ5THJ4 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 RPL23AP67-201ENST00000465341 474 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AHI1-217ENST00000534469 680 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AC011602.1-201ENST00000546484 331 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 VN1R78P-201ENST00000597393 564 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 MIR7843-201ENST00000622274 79 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AC009313.2-201ENST00000417893 1941 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 FTH1P6-201ENST00000430768 320 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AL049874.4-201ENST00000557593 255 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AC107027.3-201ENST00000565095 3473 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 RPL23AP23-201ENST00000452590 471 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AC132942.1-201ENST00000486753 483 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 MTND4P2-201ENST00000507767 1203 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AC017037.2-201ENST00000513850 890 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 IGKV2-36-201ENST00000519999 223 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 RNA5SP68-201ENST00000363885 119 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.98□□□□□ -2.09
VPS13DQ5THJ4 ANP32BP2-201ENST00000454525 545 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms