Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
SUMO3P55854 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 AC021242.1-201ENST00000507315 2035 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 AC092447.10-201ENST00000620607 1652 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.55□□□□□ -1.68
SUMO3P55854 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 AC090229.1-201ENST00000590983 1609 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.55□□□□□ -1.68
SUMO3P55854 SNORA70.10-201ENST00000384515 134 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 RPS3AP23-201ENST00000401762 784 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.55□□□□□ -1.68
SUMO3P55854 Y_RNA.598-201ENST00000410480 95 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 RNU2-15P-201ENST00000410692 191 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 RPL23AP27-201ENST00000415161 451 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AC005517.2-201ENST00000424673 553 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.55□□□□□ -1.68
SUMO3P55854 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.55□□□□□ -1.68
SUMO3P55854 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.55□□□□□ -1.68
SUMO3P55854 MTND1P34-201ENST00000438556 671 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 RPL34P20-201ENST00000442771 351 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 CEACAMP7-201ENST00000444105 496 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 USP9YP12-201ENST00000450481 570 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 CEACAMP6-201ENST00000452007 574 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 AL691482.1-201ENST00000453255 87 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 BTF3P5-201ENST00000457252 467 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 SNORD42A-201ENST00000459584 64 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 RN7SL517P-201ENST00000462240 305 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AC146507.1-201ENST00000468335 354 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.55□□□□□ -1.68
SUMO3P55854 RPSAP50-201ENST00000481955 852 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 MTND4LP31-201ENST00000514859 294 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 Y_RNA.719-201ENST00000517156 106 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.55□□□□□ -1.68
SUMO3P55854 AC024224.1-201ENST00000538284 609 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.55□□□□□ -1.68
SUMO3P55854 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC4.55□□□□□ -1.68
SUMO3P55854 MIR3691-201ENST00000578066 90 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 MIR4691-201ENST00000583764 85 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 TPMTP1-201ENST00000592307 737 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AC068790.6-201ENST00000602558 258 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 AC099669.2-201ENST00000616549 437 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AC009237.17-201ENST00000618111 748 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.55□□□□□ -1.68
SUMO3P55854 AL603839.4-201ENST00000624658 1005 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 AL353662.3-201ENST00000625131 237 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.55□□□□□ -1.68
SUMO3P55854 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
SUMO3P55854 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.55□□□□□ -1.68
SUMO3P55854 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.55□□□□□ -1.68
SUMO3P55854 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SUMO3P55854 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SUMO3P55854 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
SUMO3P55854 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SUMO3P55854 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SUMO3P55854 RNA5SP428-201ENST00000365129 132 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 RNA5SP455-201ENST00000365190 119 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.54□□□□□ -1.68
SUMO3P55854 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SUMO3P55854 U3.29-201ENST00000391296 212 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 OR6C69P-201ENST00000394268 893 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC4.54□□□□□ -1.68
SUMO3P55854 AL121878.1-201ENST00000418638 859 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.54□□□□□ -1.68
SUMO3P55854 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SUMO3P55854 AL356583.2-201ENST00000426536 280 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.54□□□□□ -1.68
SUMO3P55854 RPL23AP33-201ENST00000442301 452 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.54□□□□□ -1.68
SUMO3P55854 RPL7P52-201ENST00000449200 742 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 PDSS1P2-201ENST00000449397 678 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.54□□□□□ -1.68
SUMO3P55854 GYG1P1-201ENST00000460864 698 ntBASIC4.54□□□□□ -1.68
SUMO3P55854 RPS17P2-201ENST00000461663 408 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms