Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 FP325313.1-201ENST00000638228 703 ntBASIC3.9□□□□□ -1.79
CDH11P55287 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH11P55287 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH11P55287 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH11P55287 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.9□□□□□ -1.79
CDH11P55287 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH11P55287 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.9□□□□□ -1.79
CDH11P55287 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH11P55287 AC068254.2-201ENST00000623938 3577 ntBASIC3.89□□□□□ -1.79
CDH11P55287 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH11P55287 ZNF962P-201ENST00000443465 3140 ntBASIC3.89□□□□□ -1.79
CDH11P55287 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH11P55287 CYP1D1P-201ENST00000416662 1433 ntBASIC3.89□□□□□ -1.79
CDH11P55287 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDH11P55287 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH11P55287 RNU6-251P-201ENST00000363235 104 ntBASIC3.89□□□□□ -1.79
CDH11P55287 RNU6-1293P-201ENST00000384077 107 ntBASIC3.89□□□□□ -1.79
CDH11P55287 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDH11P55287 MTCO3P31-201ENST00000405526 789 ntBASIC3.89□□□□□ -1.79
CDH11P55287 RNA5SP39-201ENST00000411245 120 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AL450992.3-201ENST00000413192 568 ntBASIC3.89□□□□□ -1.79
CDH11P55287 SNRPFP1-201ENST00000414761 252 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC233981.1-201ENST00000423224 461 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 RPP40P1-201ENST00000426762 456 ntBASIC3.89□□□□□ -1.79
CDH11P55287 IFNNP1-201ENST00000429219 553 ntBASIC3.89□□□□□ -1.79
CDH11P55287 RPS6P15-201ENST00000431996 751 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH11P55287 PHBP16-201ENST00000446318 950 ntBASIC3.89□□□□□ -1.79
CDH11P55287 MTCO2P25-201ENST00000447065 681 ntBASIC3.89□□□□□ -1.79
CDH11P55287 FTH1P2-201ENST00000466086 412 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AP000893.1-201ENST00000474462 794 ntBASIC3.89□□□□□ -1.79
CDH11P55287 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH11P55287 RN7SL810P-201ENST00000493031 276 ntBASIC3.89□□□□□ -1.79
CDH11P55287 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH11P55287 AC146944.2-203ENST00000502493 354 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC025554.1-201ENST00000505641 188 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC139495.1-202ENST00000513164 354 ntBASIC3.89□□□□□ -1.79
CDH11P55287 RNU6-488P-201ENST00000515918 99 ntBASIC3.89□□□□□ -1.79
CDH11P55287 RN7SKP96-201ENST00000516948 297 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.89□□□□□ -1.79
CDH11P55287 AP000790.1-201ENST00000528891 737 ntBASIC3.89□□□□□ -1.79
CDH11P55287 DEFB109D-201ENST00000529497 240 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 AP000619.3-201ENST00000535634 1127 ntBASIC3.89□□□□□ -1.79
CDH11P55287 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH11P55287 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 AC068831.4-201ENST00000556118 109 ntBASIC3.89□□□□□ -1.79
CDH11P55287 DUXAP1-201ENST00000556632 463 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC090515.3-201ENST00000560431 315 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AL132657.2-201ENST00000564417 358 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH11P55287 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH11P55287 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.89□□□□□ -1.79
CDH11P55287 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH11P55287 AC012603.1-201ENST00000606424 528 ntBASIC3.89□□□□□ -1.79
CDH11P55287 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH11P55287 MIR6716-201ENST00000613413 80 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC233309.1-201ENST00000619522 751 ntBASIC3.89□□□□□ -1.79
CDH11P55287 RNU6-156P-201ENST00000621869 107 ntBASIC3.89□□□□□ -1.79
CDH11P55287 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH11P55287 AC011944.2-201ENST00000624440 683 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC008785.1-201ENST00000624475 456 ntBASIC3.89□□□□□ -1.79
CDH11P55287 AC079416.3-201ENST00000624479 549 ntBASIC3.89□□□□□ -1.79
CDH11P55287 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH11P55287 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CDH11P55287 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH11P55287 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH11P55287 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH11P55287 AC104454.1-201ENST00000421341 1401 ntBASIC3.88□□□□□ -1.79
CDH11P55287 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH11P55287 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH11P55287 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH11P55287 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH11P55287 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CDH11P55287 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDH11P55287 Z99496.1-201ENST00000469424 1477 ntBASIC3.88□□□□□ -1.79
CDH11P55287 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH11P55287 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH11P55287 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CDH11P55287 RNU6-1066P-201ENST00000363573 105 ntBASIC3.88□□□□□ -1.79
CDH11P55287 RNU6-621P-201ENST00000364752 109 ntBASIC3.88□□□□□ -1.79
CDH11P55287 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH11P55287 TMSB10P2-201ENST00000416049 131 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC008280.1-201ENST00000418851 412 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH11P55287 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.88□□□□□ -1.79
CDH11P55287 AC234779.1-201ENST00000425910 285 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AL158073.1-201ENST00000426848 1104 ntBASIC3.88□□□□□ -1.79
CDH11P55287 RPL31P54-201ENST00000429803 370 ntBASIC3.88□□□□□ -1.79
CDH11P55287 ATP5F1P1-201ENST00000433775 569 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC023347.2-201ENST00000433994 462 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AL008629.1-201ENST00000438615 184 ntBASIC3.88□□□□□ -1.79
CDH11P55287 AC092393.1-201ENST00000439625 742 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms