Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 AC131235.4-201ENST00000609288 620 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 AC007490.1-201ENST00000624321 703 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.41□□□□□ -1.7
NR1H2P55055 AC116618.1-201ENST00000634617 774 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 AL391684.1-202ENST00000641293 1636 ntBASIC4.41□□□□□ -1.7
NR1H2P55055 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.41□□□□□ -1.7
NR1H2P55055 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.41□□□□□ -1.7
NR1H2P55055 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
NR1H2P55055 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.4□□□□□ -1.7
NR1H2P55055 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NR1H2P55055 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.4□□□□□ -1.7
NR1H2P55055 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.4□□□□□ -1.7
NR1H2P55055 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
NR1H2P55055 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
NR1H2P55055 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.4□□□□□ -1.7
NR1H2P55055 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
NR1H2P55055 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
NR1H2P55055 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H2P55055 SNORD82-201ENST00000365530 70 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 RNU6-157P-201ENST00000383957 107 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC016769.3-201ENST00000396562 315 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H2P55055 AL450338.1-201ENST00000407987 512 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC068533.2-201ENST00000411872 306 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 LINC00993-201ENST00000420453 540 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.71
NR1H2P55055 C4BPAP2-201ENST00000428434 478 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.4□□□□□ -1.71
NR1H2P55055 MTND1P32-201ENST00000433043 938 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC091390.1-201ENST00000433904 331 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.4□□□□□ -1.71
NR1H2P55055 MTND3P1-201ENST00000441336 220 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.4□□□□□ -1.71
NR1H2P55055 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H2P55055 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H2P55055 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H2P55055 OR6K5P-201ENST00000447050 945 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H2P55055 AC104978.1-201ENST00000449387 391 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 RPL12P26-201ENST00000452430 487 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 RPL18AP17-201ENST00000455326 198 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 RPS20P24-201ENST00000457473 361 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 RN7SL354P-201ENST00000469282 294 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC108078.3-201ENST00000502633 489 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H2P55055 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H2P55055 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H2P55055 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H2P55055 AC010587.2-201ENST00000511727 448 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H2P55055 IGKV1-32-201ENST00000519290 311 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 IFITM8P-201ENST00000522529 394 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.4□□□□□ -1.71
NR1H2P55055 HSPA8P13-201ENST00000523715 472 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.4□□□□□ -1.71
NR1H2P55055 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.4□□□□□ -1.71
NR1H2P55055 AC021006.3-201ENST00000530771 192 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 EMP1-206ENST00000537612 505 ntTSL 3 BASIC4.4□□□□□ -1.71
NR1H2P55055 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.4□□□□□ -1.71
NR1H2P55055 AL512347.1-201ENST00000566420 503 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC103792.1-201ENST00000603591 919 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AL158042.1-201ENST00000605338 460 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC097065.2-201ENST00000608159 533 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AP001521.2-201ENST00000608772 546 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AL161616.1-201ENST00000611867 286 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AL627230.1-201ENST00000613077 211 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AL591926.8-201ENST00000616876 211 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC131159.1-201ENST00000621854 213 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 U6.101-201ENST00000637707 76 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
NR1H2P55055 AP000776.1-201ENST00000530032 1663 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H2P55055 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.4□□□□□ -1.71
NR1H2P55055 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.4□□□□□ -1.71
NR1H2P55055 NUP58P1-201ENST00000502546 1738 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H2P55055 MTCO1P23-201ENST00000415223 1526 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 AC011266.1-201ENST00000624119 3569 ntBASIC4.4□□□□□ -1.71
NR1H2P55055 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H2P55055 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.4□□□□□ -1.71
NR1H2P55055 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H2P55055 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
NR1H2P55055 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.4□□□□□ -1.71
NR1H2P55055 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NR1H2P55055 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.39□□□□□ -1.71
NR1H2P55055 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NR1H2P55055 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NR1H2P55055 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NR1H2P55055 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NR1H2P55055 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
NR1H2P55055 RN7SKP44-201ENST00000363602 316 ntBASIC4.39□□□□□ -1.71
NR1H2P55055 RNA5SP22-201ENST00000365393 109 ntBASIC4.39□□□□□ -1.71
NR1H2P55055 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.39□□□□□ -1.71
NR1H2P55055 Y_RNA.408-201ENST00000383987 102 ntBASIC4.39□□□□□ -1.71
NR1H2P55055 RNU6-761P-201ENST00000384148 107 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms