Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
NUP98P52948 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
NUP98P52948 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
NUP98P52948 AC007336.1-201ENST00000576365 3828 ntBASIC3.67□□□□□ -1.82
NUP98P52948 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
NUP98P52948 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 RNU6-851P-201ENST00000384565 107 ntBASIC3.67□□□□□ -1.82
NUP98P52948 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.67□□□□□ -1.82
NUP98P52948 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP98P52948 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.67□□□□□ -1.82
NUP98P52948 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.67□□□□□ -1.82
NUP98P52948 AC004832.5-201ENST00000608677 401 ntBASIC3.67□□□□□ -1.82
NUP98P52948 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.67□□□□□ -1.82
NUP98P52948 AC231759.1-201ENST00000616455 597 ntBASIC3.67□□□□□ -1.82
NUP98P52948 AC007318.2-201ENST00000620999 243 ntBASIC3.67□□□□□ -1.82
NUP98P52948 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
NUP98P52948 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP98P52948 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.66□□□□□ -1.82
NUP98P52948 AL592494.2-201ENST00000425455 1548 ntBASIC3.66□□□□□ -1.82
NUP98P52948 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
NUP98P52948 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUP98P52948 SNORD56.3-201ENST00000363507 71 ntBASIC3.66□□□□□ -1.82
NUP98P52948 MIR184-201ENST00000384962 84 ntBASIC3.66□□□□□ -1.82
NUP98P52948 RPS7P13-201ENST00000413955 498 ntBASIC3.66□□□□□ -1.82
NUP98P52948 RPL30P2-201ENST00000414021 291 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AL645937.1-202ENST00000421799 937 ntBASIC3.66□□□□□ -1.82
NUP98P52948 RPL21P40-201ENST00000428586 483 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AL365396.1-201ENST00000430854 671 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AC108938.1-201ENST00000451204 136 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AC126389.1-201ENST00000477436 290 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AC004924.1-201ENST00000480160 781 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AC114967.1-201ENST00000504890 259 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AC112184.1-201ENST00000505179 312 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP98P52948 AL512310.1-201ENST00000548639 172 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.66□□□□□ -1.82
NUP98P52948 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC3.66□□□□□ -1.82
NUP98P52948 AL390838.2-201ENST00000602394 274 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AL592295.2-201ENST00000612578 206 ntBASIC3.66□□□□□ -1.82
NUP98P52948 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC3.66□□□□□ -1.82
NUP98P52948 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
NUP98P52948 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
NUP98P52948 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.66□□□□□ -1.82
NUP98P52948 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUP98P52948 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
NUP98P52948 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.66□□□□□ -1.82
NUP98P52948 AC092111.2-201ENST00000611627 1414 ntBASIC3.66□□□□□ -1.82
NUP98P52948 MTCO1P8-201ENST00000416914 1523 ntBASIC3.66□□□□□ -1.82
NUP98P52948 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.66□□□□□ -1.82
NUP98P52948 MIR9-1-201ENST00000385198 89 ntBASIC3.65□□□□□ -1.82
NUP98P52948 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NUP98P52948 RANP7-201ENST00000418085 644 ntBASIC3.65□□□□□ -1.82
NUP98P52948 RPS12P23-201ENST00000419579 400 ntBASIC3.65□□□□□ -1.82
NUP98P52948 SETP10-201ENST00000424368 814 ntBASIC3.65□□□□□ -1.82
NUP98P52948 NPM1P24-201ENST00000428039 894 ntBASIC3.65□□□□□ -1.82
NUP98P52948 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.65□□□□□ -1.82
NUP98P52948 HMGB3P6-201ENST00000444896 598 ntBASIC3.65□□□□□ -1.82
NUP98P52948 HMGN2P7-201ENST00000456186 273 ntBASIC3.65□□□□□ -1.82
NUP98P52948 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.65□□□□□ -1.82
NUP98P52948 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.65□□□□□ -1.82
NUP98P52948 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.65□□□□□ -1.82
NUP98P52948 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
NUP98P52948 ZNF90P1-201ENST00000480493 1951 ntBASIC3.65□□□□□ -1.82
NUP98P52948 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.65□□□□□ -1.82
NUP98P52948 AC107027.3-201ENST00000565095 3473 ntBASIC3.65□□□□□ -1.82
NUP98P52948 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.82
NUP98P52948 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
NUP98P52948 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.65□□□□□ -1.83
NUP98P52948 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUP98P52948 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
NUP98P52948 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NUP98P52948 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NUP98P52948 RNU1-112P-201ENST00000364401 164 ntBASIC3.65□□□□□ -1.83
NUP98P52948 U3.11-201ENST00000364476 212 ntBASIC3.65□□□□□ -1.83
NUP98P52948 ARF4P3-201ENST00000397387 509 ntBASIC3.65□□□□□ -1.83
NUP98P52948 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.65□□□□□ -1.83
NUP98P52948 AC239798.3-201ENST00000454459 408 ntBASIC3.65□□□□□ -1.83
NUP98P52948 RFPL4AP3-201ENST00000515267 345 ntBASIC3.65□□□□□ -1.83
NUP98P52948 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.65□□□□□ -1.83
NUP98P52948 AC079600.2-201ENST00000550076 130 ntBASIC3.65□□□□□ -1.83
NUP98P52948 AL359535.1-201ENST00000612100 1087 ntBASIC3.65□□□□□ -1.83
NUP98P52948 AL590240.3-201ENST00000621416 943 ntBASIC3.65□□□□□ -1.83
NUP98P52948 AL049555.1-201ENST00000562834 1933 ntBASIC3.65□□□□□ -1.83
NUP98P52948 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
NUP98P52948 AL606537.1-201ENST00000607258 2011 ntBASIC3.64□□□□□ -1.83
NUP98P52948 AL136360.1-201ENST00000503377 1900 ntBASIC3.64□□□□□ -1.83
NUP98P52948 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.64□□□□□ -1.83
NUP98P52948 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUP98P52948 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NUP98P52948 RNU4-44P-201ENST00000363050 141 ntBASIC3.64□□□□□ -1.83
NUP98P52948 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NUP98P52948 MIR137-201ENST00000385223 102 ntBASIC3.64□□□□□ -1.83
NUP98P52948 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms