Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 RNU2-30P-201ENST00000516209 141 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AC134698.5-201ENST00000519444 336 ntBASIC4.84□□□□□ -1.63
NEK3P51956 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.84□□□□□ -1.63
NEK3P51956 AP006289.1-201ENST00000538089 277 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.84□□□□□ -1.63
NEK3P51956 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.84□□□□□ -1.63
NEK3P51956 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.84□□□□□ -1.63
NEK3P51956 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.84□□□□□ -1.63
NEK3P51956 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.84□□□□□ -1.63
NEK3P51956 AL353778.1-201ENST00000603149 408 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AP000811.1-201ENST00000603803 651 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AC091979.2-201ENST00000607514 214 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AL603755.1-201ENST00000619504 163 ntBASIC4.84□□□□□ -1.63
NEK3P51956 MIR6853-201ENST00000619642 74 ntBASIC4.84□□□□□ -1.63
NEK3P51956 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.84□□□□□ -1.63
NEK3P51956 AC140113.4-201ENST00000622087 222 ntBASIC4.84□□□□□ -1.63
NEK3P51956 AC004009.2-201ENST00000623016 728 ntBASIC4.84□□□□□ -1.63
NEK3P51956 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.84□□□□□ -1.63
NEK3P51956 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
NEK3P51956 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEK3P51956 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
NEK3P51956 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
NEK3P51956 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
NEK3P51956 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEK3P51956 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEK3P51956 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEK3P51956 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.83□□□□□ -1.64
NEK3P51956 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
NEK3P51956 AC079741.1-201ENST00000321498 212 ntBASIC4.83□□□□□ -1.64
NEK3P51956 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NEK3P51956 Y_RNA.18-201ENST00000362461 102 ntBASIC4.83□□□□□ -1.64
NEK3P51956 RNU1-94P-201ENST00000362627 173 ntBASIC4.83□□□□□ -1.64
NEK3P51956 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEK3P51956 AL133412.1-201ENST00000380194 2992 ntBASIC4.83□□□□□ -1.64
NEK3P51956 Y_RNA.493-201ENST00000384422 102 ntBASIC4.83□□□□□ -1.64
NEK3P51956 U3.29-201ENST00000391296 212 ntBASIC4.83□□□□□ -1.64
NEK3P51956 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.83□□□□□ -1.64
NEK3P51956 AC119751.6-201ENST00000416712 186 ntBASIC4.83□□□□□ -1.64
NEK3P51956 MTATP6P27-201ENST00000416987 621 ntBASIC4.83□□□□□ -1.64
NEK3P51956 AL365203.2-201ENST00000423444 196 ntBASIC4.83□□□□□ -1.64
NEK3P51956 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.83□□□□□ -1.64
NEK3P51956 AL359265.2-201ENST00000434367 631 ntBASIC4.83□□□□□ -1.64
NEK3P51956 RPS17P8-201ENST00000434525 335 ntBASIC4.83□□□□□ -1.64
NEK3P51956 AC016831.4-201ENST00000438302 307 ntBASIC4.83□□□□□ -1.64
NEK3P51956 NDUFS5P3-201ENST00000450668 321 ntBASIC4.83□□□□□ -1.64
NEK3P51956 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.83□□□□□ -1.64
NEK3P51956 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.83□□□□□ -1.64
NEK3P51956 RPS29P33-201ENST00000456717 146 ntBASIC4.83□□□□□ -1.64
NEK3P51956 RNU7-136P-201ENST00000458819 69 ntBASIC4.83□□□□□ -1.64
NEK3P51956 SYPL1P1-201ENST00000473622 768 ntBASIC4.83□□□□□ -1.64
NEK3P51956 S100A11P1-201ENST00000477525 312 ntBASIC4.83□□□□□ -1.64
NEK3P51956 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
NEK3P51956 RNU1-6P-201ENST00000516290 144 ntBASIC4.83□□□□□ -1.64
NEK3P51956 RNU6-709P-201ENST00000517257 104 ntBASIC4.83□□□□□ -1.64
NEK3P51956 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.83□□□□□ -1.64
NEK3P51956 AC008015.1-201ENST00000555505 465 ntBASIC4.83□□□□□ -1.64
NEK3P51956 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.83□□□□□ -1.64
NEK3P51956 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.83□□□□□ -1.64
NEK3P51956 AC234771.5-201ENST00000600161 514 ntBASIC4.83□□□□□ -1.64
NEK3P51956 AL133507.1-201ENST00000605269 557 ntBASIC4.83□□□□□ -1.64
NEK3P51956 VIS1.1-201ENST00000610517 203 ntBASIC4.83□□□□□ -1.64
NEK3P51956 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.83□□□□□ -1.64
NEK3P51956 AL607023.1-201ENST00000620045 248 ntBASIC4.83□□□□□ -1.64
NEK3P51956 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.83□□□□□ -1.64
NEK3P51956 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
NEK3P51956 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
NEK3P51956 AL445487.1-201ENST00000415694 1580 ntBASIC4.82□□□□□ -1.64
NEK3P51956 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.82□□□□□ -1.64
NEK3P51956 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEK3P51956 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEK3P51956 TLK1P1-201ENST00000456760 2440 ntBASIC4.82□□□□□ -1.64
NEK3P51956 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEK3P51956 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
NEK3P51956 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
NEK3P51956 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.82□□□□□ -1.64
NEK3P51956 RNU6-398P-201ENST00000384143 109 ntBASIC4.82□□□□□ -1.64
NEK3P51956 MIR195-201ENST00000385194 87 ntBASIC4.82□□□□□ -1.64
NEK3P51956 CYCSP45-201ENST00000402289 315 ntBASIC4.82□□□□□ -1.64
NEK3P51956 RNA5SP146-201ENST00000410743 123 ntBASIC4.82□□□□□ -1.64
NEK3P51956 RPS12P5-201ENST00000423449 371 ntBASIC4.82□□□□□ -1.64
NEK3P51956 AC234781.2-201ENST00000426370 994 ntBASIC4.82□□□□□ -1.64
NEK3P51956 EZH2P1-201ENST00000431167 291 ntBASIC4.82□□□□□ -1.64
NEK3P51956 MUPP-201ENST00000438111 566 ntBASIC4.82□□□□□ -1.64
NEK3P51956 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.82□□□□□ -1.64
NEK3P51956 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.82□□□□□ -1.64
NEK3P51956 ARL4AP3-201ENST00000441452 574 ntBASIC4.82□□□□□ -1.64
NEK3P51956 AL591503.2-201ENST00000442314 1005 ntBASIC4.82□□□□□ -1.64
NEK3P51956 H2AFZP6-201ENST00000444403 394 ntBASIC4.82□□□□□ -1.64
NEK3P51956 OR6K5P-201ENST00000447050 945 ntBASIC4.82□□□□□ -1.64
NEK3P51956 ART2BP-201ENST00000453501 499 ntBASIC4.82□□□□□ -1.64
NEK3P51956 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.82□□□□□ -1.64
NEK3P51956 RN7SL817P-201ENST00000480777 288 ntBASIC4.82□□□□□ -1.64
NEK3P51956 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
NEK3P51956 AC119751.5-201ENST00000514077 770 ntBASIC4.82□□□□□ -1.64
NEK3P51956 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
NEK3P51956 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.82□□□□□ -1.64
NEK3P51956 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.82□□□□□ -1.64
NEK3P51956 FKBP1BP1-201ENST00000553366 325 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms