Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCNN1AP37088 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCNN1AP37088 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SCNN1AP37088 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCNN1AP37088 AC097063.1-201ENST00000426714 1797 ntBASIC6.16□□□□□ -1.42
SCNN1AP37088 STX3-208ENST00000641815 3236 ntBASIC6.16□□□□□ -1.42
SCNN1AP37088 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.16□□□□□ -1.42
SCNN1AP37088 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SCNN1AP37088 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
SCNN1AP37088 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
SCNN1AP37088 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCNN1AP37088 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCNN1AP37088 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCNN1AP37088 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCNN1AP37088 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCNN1AP37088 RNA5SP273-201ENST00000362484 113 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 Y_RNA.216-201ENST00000364205 93 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 Y_RNA.231-201ENST00000364358 102 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 RN7SKP6-201ENST00000364795 319 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
SCNN1AP37088 AL354890.1-201ENST00000413730 346 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 RPL23AP38-201ENST00000423801 469 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 ERLEC1P1-201ENST00000433806 578 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC6.15□□□□□ -1.42
SCNN1AP37088 EIF5AP4-201ENST00000441206 465 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.15□□□□□ -1.42
SCNN1AP37088 SPRYD7P1-201ENST00000443861 570 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 RPL21P89-201ENST00000444021 467 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 Z95327.1-201ENST00000446082 482 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.15□□□□□ -1.42
SCNN1AP37088 CBX1P2-201ENST00000453841 458 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 FRG2FP-204ENST00000453982 852 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 snoU109.4-201ENST00000458953 143 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 RNU7-182P-201ENST00000459009 62 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 SNORD19B-201ENST00000459623 84 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AC007547.1-201ENST00000462177 490 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.15□□□□□ -1.42
SCNN1AP37088 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCNN1AP37088 RNU6-1314P-201ENST00000517139 104 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 RN7SKP256-201ENST00000517201 314 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCNN1AP37088 IGLVIV-53-201ENST00000520107 367 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.15□□□□□ -1.42
SCNN1AP37088 AC078899.1-201ENST00000521432 1185 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.15□□□□□ -1.42
SCNN1AP37088 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC6.15□□□□□ -1.42
SCNN1AP37088 PCNAP4-201ENST00000532690 730 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SCNN1AP37088 MIR4742-201ENST00000581069 85 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AC090948.1-201ENST00000607464 549 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AC040896.1-201ENST00000613819 479 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 MIR6778-201ENST00000617912 73 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 AC090971.5-201ENST00000621102 293 ntBASIC6.15□□□□□ -1.42
SCNN1AP37088 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC6.15□□□□□ -1.42
SCNN1AP37088 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SCNN1AP37088 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SCNN1AP37088 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SCNN1AP37088 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.15□□□□□ -1.43
SCNN1AP37088 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SCNN1AP37088 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.15□□□□□ -1.43
SCNN1AP37088 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SCNN1AP37088 AC073365.1-203ENST00000641055 1992 ntBASIC6.15□□□□□ -1.43
SCNN1AP37088 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC6.14□□□□□ -1.43
SCNN1AP37088 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SCNN1AP37088 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SCNN1AP37088 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
SCNN1AP37088 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 Y_RNA.367-201ENST00000365544 101 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 Y_RNA.384-201ENST00000383909 102 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 RNU6-1160P-201ENST00000384546 104 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 MIR514A2-201ENST00000385131 88 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 MIR514A3-201ENST00000385132 88 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.14□□□□□ -1.43
SCNN1AP37088 RNU2-29P-201ENST00000410423 189 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 NAP1L1P2-201ENST00000414182 1089 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 AC092651.1-201ENST00000426110 312 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.14□□□□□ -1.43
SCNN1AP37088 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.14□□□□□ -1.43
SCNN1AP37088 RPL35AP22-201ENST00000436855 335 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 MTND3P2-201ENST00000438452 342 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 HMGB1P18-201ENST00000438801 619 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.14□□□□□ -1.43
SCNN1AP37088 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.14□□□□□ -1.43
SCNN1AP37088 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SCNN1AP37088 RNU1-88P-201ENST00000459274 128 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 RPS17P15-201ENST00000475609 349 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 AC006539.1-201ENST00000481419 501 ntBASIC6.14□□□□□ -1.43
SCNN1AP37088 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.14□□□□□ -1.43
SCNN1AP37088 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.14□□□□□ -1.43
SCNN1AP37088 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
SCNN1AP37088 RNU4-29P-201ENST00000515943 174 ntBASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms