Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MTCO1P35-201ENST00000515270 228 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 RNU6-579P-201ENST00000516879 102 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.2□□□□□ -1.9
CD40LGP29965 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.2□□□□□ -1.9
CD40LGP29965 AC104115.2-201ENST00000523026 687 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.2□□□□□ -1.9
CD40LGP29965 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.2□□□□□ -1.9
CD40LGP29965 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.2□□□□□ -1.9
CD40LGP29965 OR4T1P-201ENST00000554933 911 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.2□□□□□ -1.9
CD40LGP29965 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.2□□□□□ -1.9
CD40LGP29965 YWHAQP7-201ENST00000603536 658 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 IGHV3-29-201ENST00000604817 344 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 AC110792.4-201ENST00000609843 298 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 AL390240.1-201ENST00000612950 384 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD40LGP29965 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CD40LGP29965 U73479.1-201ENST00000618062 168 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD40LGP29965 AC073530.2-201ENST00000623987 261 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.2□□□□□ -1.9
CD40LGP29965 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CD40LGP29965 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
CD40LGP29965 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.2□□□□□ -1.9
CD40LGP29965 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.2□□□□□ -1.9
CD40LGP29965 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD40LGP29965 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD40LGP29965 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CD40LGP29965 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 CASC19-261ENST00000641853 1638 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 RNU11-4P-201ENST00000391149 133 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.19□□□□□ -1.9
CD40LGP29965 RNU6-564P-201ENST00000410983 104 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.19□□□□□ -1.9
CD40LGP29965 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.19□□□□□ -1.9
CD40LGP29965 AL356806.1-201ENST00000422524 916 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AL513174.1-201ENST00000423182 629 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40LGP29965 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40LGP29965 Z74696.2-201ENST00000436514 498 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40LGP29965 AL357552.1-201ENST00000445254 415 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 RPL6P5-201ENST00000445678 828 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.19□□□□□ -1.9
CD40LGP29965 RPL7P19-201ENST00000469948 618 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 GAPDHP36-201ENST00000480688 918 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AC108078.3-201ENST00000502633 489 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40LGP29965 AC016065.2-201ENST00000514530 444 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 RNA5SP179-201ENST00000517284 121 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AF279873.1-201ENST00000523393 313 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.19□□□□□ -1.9
CD40LGP29965 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40LGP29965 AC091167.4-201ENST00000605079 184 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AC016877.3-201ENST00000606778 504 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AL451074.6-201ENST00000608512 729 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.19□□□□□ -1.9
CD40LGP29965 AC016717.3-201ENST00000624730 554 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 AF001550.2-201ENST00000636643 217 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 MIR492-201ENST00000638676 116 ntBASIC3.19□□□□□ -1.9
CD40LGP29965 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
CD40LGP29965 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CD40LGP29965 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD40LGP29965 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CD40LGP29965 AC008264.2-201ENST00000610193 3731 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
CD40LGP29965 ZNF37BP-203ENST00000452306 1352 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.18□□□□□ -1.9
CD40LGP29965 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CD40LGP29965 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.18□□□□□ -1.9
CD40LGP29965 RNU6-98P-201ENST00000384173 107 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 MIR1250-201ENST00000408098 113 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 U3.39-201ENST00000408569 239 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 RN7SKP33-201ENST00000410942 340 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 RNU4-74P-201ENST00000411280 161 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 SDCBPP3-201ENST00000419629 891 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.18□□□□□ -1.9
CD40LGP29965 AL691449.1-201ENST00000426570 421 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.18□□□□□ -1.9
CD40LGP29965 NECAP1P2-201ENST00000455668 727 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.18□□□□□ -1.9
CD40LGP29965 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.18□□□□□ -1.9
CD40LGP29965 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.18□□□□□ -1.9
CD40LGP29965 AP000563.1-201ENST00000490865 758 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 AC025459.1-201ENST00000504072 156 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.18□□□□□ -1.9
CD40LGP29965 AC147055.1-201ENST00000509261 750 ntBASIC3.18□□□□□ -1.9
CD40LGP29965 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.18□□□□□ -1.9
CD40LGP29965 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms