Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
RXRBP28702 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.43□□□□□ -1.38
RXRBP28702 PAPPA-AS1-201ENST00000445861 2450 ntBASIC6.43□□□□□ -1.38
RXRBP28702 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.43□□□□□ -1.38
RXRBP28702 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RXRBP28702 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC6.43□□□□□ -1.38
RXRBP28702 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RXRBP28702 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
RXRBP28702 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RXRBP28702 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
RXRBP28702 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.43□□□□□ -1.38
RXRBP28702 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RXRBP28702 Y_RNA.460-201ENST00000384255 102 ntBASIC6.43□□□□□ -1.38
RXRBP28702 MIR589-201ENST00000385238 99 ntBASIC6.43□□□□□ -1.38
RXRBP28702 RPL23AP26-201ENST00000412728 464 ntBASIC6.43□□□□□ -1.38
RXRBP28702 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC6.43□□□□□ -1.38
RXRBP28702 YME1L1P1-201ENST00000429435 297 ntBASIC6.43□□□□□ -1.38
RXRBP28702 RPL31P54-201ENST00000429803 370 ntBASIC6.43□□□□□ -1.38
RXRBP28702 ACTR3P2-201ENST00000439585 1257 ntBASIC6.43□□□□□ -1.38
RXRBP28702 CALM1P2-201ENST00000452941 448 ntBASIC6.43□□□□□ -1.38
RXRBP28702 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.43□□□□□ -1.38
RXRBP28702 MTCO1P30-201ENST00000515244 580 ntBASIC6.43□□□□□ -1.38
RXRBP28702 AC083923.1-201ENST00000523708 376 ntBASIC6.43□□□□□ -1.38
RXRBP28702 AP001893.2-201ENST00000526949 202 ntBASIC6.43□□□□□ -1.38
RXRBP28702 AC087276.1-201ENST00000529659 480 ntBASIC6.43□□□□□ -1.38
RXRBP28702 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.43□□□□□ -1.38
RXRBP28702 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC6.43□□□□□ -1.38
RXRBP28702 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.43□□□□□ -1.38
RXRBP28702 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC6.43□□□□□ -1.38
RXRBP28702 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.43□□□□□ -1.38
RXRBP28702 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.43□□□□□ -1.38
RXRBP28702 AC019322.1-201ENST00000571869 389 ntBASIC6.43□□□□□ -1.38
RXRBP28702 AC027807.2-201ENST00000616099 408 ntBASIC6.43□□□□□ -1.38
RXRBP28702 AC073348.1-201ENST00000623002 331 ntBASIC6.43□□□□□ -1.38
RXRBP28702 AC024023.1-201ENST00000624530 922 ntBASIC6.43□□□□□ -1.38
RXRBP28702 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.43□□□□□ -1.38
RXRBP28702 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.43□□□□□ -1.38
RXRBP28702 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RXRBP28702 AC010300.1-201ENST00000600671 5134 ntBASIC6.43□□□□□ -1.38
RXRBP28702 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RXRBP28702 OR51H2P-202ENST00000641424 3046 ntBASIC6.43□□□□□ -1.38
RXRBP28702 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RXRBP28702 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.43□□□□□ -1.38
RXRBP28702 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RXRBP28702 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
RXRBP28702 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RXRBP28702 Y_RNA.111-201ENST00000363248 100 ntBASIC6.42□□□□□ -1.38
RXRBP28702 RNU5F-7P-201ENST00000363696 115 ntBASIC6.42□□□□□ -1.38
RXRBP28702 RNA5SP88-201ENST00000365560 109 ntBASIC6.42□□□□□ -1.38
RXRBP28702 RNA5SP283-201ENST00000365604 119 ntBASIC6.42□□□□□ -1.38
RXRBP28702 Y_RNA.548-201ENST00000384656 105 ntBASIC6.42□□□□□ -1.38
RXRBP28702 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RXRBP28702 IGKV1OR9-1-201ENST00000424370 284 ntBASIC6.42□□□□□ -1.38
RXRBP28702 TIMM9P3-201ENST00000428659 274 ntBASIC6.42□□□□□ -1.38
RXRBP28702 SEPT7P5-201ENST00000434048 306 ntBASIC6.42□□□□□ -1.38
RXRBP28702 UBE2FP3-201ENST00000436366 524 ntBASIC6.42□□□□□ -1.38
RXRBP28702 COX6CP18-201ENST00000448769 222 ntBASIC6.42□□□□□ -1.38
RXRBP28702 PDSS1P2-201ENST00000449397 678 ntBASIC6.42□□□□□ -1.38
RXRBP28702 AC021678.1-201ENST00000505195 936 ntBASIC6.42□□□□□ -1.38
RXRBP28702 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC6.42□□□□□ -1.38
RXRBP28702 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.42□□□□□ -1.38
RXRBP28702 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.42□□□□□ -1.38
RXRBP28702 MTCO2P4-201ENST00000517968 247 ntBASIC6.42□□□□□ -1.38
RXRBP28702 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.42□□□□□ -1.38
RXRBP28702 AF235103.2-201ENST00000525753 346 ntBASIC6.42□□□□□ -1.38
RXRBP28702 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.42□□□□□ -1.38
RXRBP28702 HPRT1P3-201ENST00000539521 576 ntBASIC6.42□□□□□ -1.38
RXRBP28702 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC6.42□□□□□ -1.38
RXRBP28702 AL157687.1-201ENST00000554853 619 ntBASIC6.42□□□□□ -1.38
RXRBP28702 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.42□□□□□ -1.38
RXRBP28702 AL133457.1-201ENST00000564251 987 ntBASIC6.42□□□□□ -1.38
RXRBP28702 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.42□□□□□ -1.38
RXRBP28702 AC011626.1-201ENST00000604710 562 ntBASIC6.42□□□□□ -1.38
RXRBP28702 AC012468.1-201ENST00000604888 430 ntBASIC6.42□□□□□ -1.38
RXRBP28702 AC019206.1-201ENST00000621938 425 ntBASIC6.42□□□□□ -1.38
RXRBP28702 AC090574.1-201ENST00000623186 233 ntBASIC6.42□□□□□ -1.38
RXRBP28702 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RXRBP28702 AC012078.1-201ENST00000405035 1646 ntBASIC6.42□□□□□ -1.38
RXRBP28702 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RXRBP28702 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RXRBP28702 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC6.42□□□□□ -1.38
RXRBP28702 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RXRBP28702 AC140134.1-201ENST00000511830 3544 ntBASIC6.42□□□□□ -1.38
RXRBP28702 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
RXRBP28702 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.42□□□□□ -1.38
RXRBP28702 AC015813.6-201ENST00000624409 5808 ntBASIC6.42□□□□□ -1.38
RXRBP28702 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RXRBP28702 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RXRBP28702 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RXRBP28702 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RXRBP28702 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RXRBP28702 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.41□□□□□ -1.38
RXRBP28702 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RXRBP28702 Y_RNA.573-201ENST00000384763 105 ntBASIC6.41□□□□□ -1.38
RXRBP28702 PPIAP9-201ENST00000403866 498 ntBASIC6.41□□□□□ -1.38
RXRBP28702 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.41□□□□□ -1.38
RXRBP28702 MTCO1P20-201ENST00000425366 358 ntBASIC6.41□□□□□ -1.38
RXRBP28702 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC6.41□□□□□ -1.38
RXRBP28702 AC007389.2-201ENST00000434630 306 ntBASIC6.41□□□□□ -1.38
RXRBP28702 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 121.3 ms