Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.71□□□□□ -1.82
XRCC1P18887 TRMT10BP1-201ENST00000519377 943 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC022695.1-201ENST00000522089 237 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.71□□□□□ -1.82
XRCC1P18887 AC139103.1-201ENST00000534696 1030 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AL442163.2-201ENST00000553912 710 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.71□□□□□ -1.82
XRCC1P18887 CYP2C60P-201ENST00000566088 139 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.71□□□□□ -1.82
XRCC1P18887 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.71□□□□□ -1.82
XRCC1P18887 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.71□□□□□ -1.82
XRCC1P18887 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.71□□□□□ -1.82
XRCC1P18887 VN1R88P-201ENST00000596787 292 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 MTATP6P2-201ENST00000603319 678 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AL049634.3-201ENST00000604968 457 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC026741.1-201ENST00000605892 482 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AL354760.1-201ENST00000608357 643 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC004943.3-201ENST00000624116 600 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 AC106730.3-201ENST00000624568 641 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.71□□□□□ -1.82
XRCC1P18887 XPOTP1-201ENST00000443317 2398 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
XRCC1P18887 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
XRCC1P18887 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.71□□□□□ -1.82
XRCC1P18887 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.71□□□□□ -1.82
XRCC1P18887 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
XRCC1P18887 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
XRCC1P18887 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
XRCC1P18887 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
XRCC1P18887 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
XRCC1P18887 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.7□□□□□ -1.82
XRCC1P18887 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.7□□□□□ -1.82
XRCC1P18887 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
XRCC1P18887 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
XRCC1P18887 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
XRCC1P18887 MIR200C-201ENST00000384980 68 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
XRCC1P18887 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.7□□□□□ -1.82
XRCC1P18887 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.7□□□□□ -1.82
XRCC1P18887 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.7□□□□□ -1.82
XRCC1P18887 TCEA1P2-201ENST00000420496 906 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.7□□□□□ -1.82
XRCC1P18887 AL139247.1-201ENST00000422768 325 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 OR4F13P-201ENST00000428478 931 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC002542.1-201ENST00000440683 193 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AL158053.1-201ENST00000441503 453 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AC098824.1-201ENST00000453565 980 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AC008280.2-201ENST00000455473 307 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 GTF2IP12-201ENST00000456547 356 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC018635.1-201ENST00000468292 1030 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC110792.2-201ENST00000510278 224 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AC005351.1-201ENST00000511152 786 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 RPL7L1P13-201ENST00000511702 739 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 RN7SKP96-201ENST00000516948 297 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 RNU6-334P-201ENST00000517072 102 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC3.7□□□□□ -1.82
XRCC1P18887 HMGB1P1-201ENST00000522557 636 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC011611.5-201ENST00000552477 578 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 MIR4444-1-201ENST00000581696 74 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.7□□□□□ -1.82
XRCC1P18887 MIR4444-2-201ENST00000584390 74 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AL158211.2-201ENST00000607282 395 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.7□□□□□ -1.82
XRCC1P18887 AL391497.1-201ENST00000608671 547 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.7□□□□□ -1.82
XRCC1P18887 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.7□□□□□ -1.82
XRCC1P18887 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC024560.2-201ENST00000507981 1497 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
XRCC1P18887 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
XRCC1P18887 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
XRCC1P18887 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.7□□□□□ -1.82
XRCC1P18887 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.7□□□□□ -1.82
XRCC1P18887 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
XRCC1P18887 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.7□□□□□ -1.82
XRCC1P18887 AC025125.1-201ENST00000624743 1922 ntBASIC3.7□□□□□ -1.82
XRCC1P18887 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
XRCC1P18887 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
XRCC1P18887 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
XRCC1P18887 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
XRCC1P18887 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
XRCC1P18887 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
XRCC1P18887 RNA5SP124-201ENST00000362739 110 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
XRCC1P18887 AL359837.1-201ENST00000381357 287 ntBASIC3.69□□□□□ -1.82
XRCC1P18887 DNAJC19P6-201ENST00000401853 280 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms