Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD8P13378 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 EIF3KP3-201ENST00000514461 639 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AC105417.1-201ENST00000514691 285 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AC097504.1-201ENST00000515103 2415 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 RNU6-941P-201ENST00000516346 108 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 RNU6-1046P-201ENST00000516538 107 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 RNU6-410P-201ENST00000517006 107 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 RNU6-1220P-201ENST00000517126 108 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD8P13378 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD8P13378 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD8P13378 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD8P13378 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC6.12□□□□□ -1.43
HOXD8P13378 SNRPGP17-201ENST00000603780 214 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AC103710.3-201ENST00000608157 948 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AC090425.1-201ENST00000610007 140 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD8P13378 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 AL352984.2-202ENST00000613699 155 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 CR381572.1-201ENST00000625098 102 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 AP000550.3-201ENST00000637734 379 ntBASIC6.12□□□□□ -1.43
HOXD8P13378 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
HOXD8P13378 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.12□□□□□ -1.43
HOXD8P13378 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXD8P13378 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXD8P13378 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXD8P13378 AC140479.2-201ENST00000421567 3130 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 AL121886.1-201ENST00000358609 435 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 SNORA67-201ENST00000384423 137 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 MIR1-2-201ENST00000384961 85 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AL133388.1-201ENST00000404509 287 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 RN7SKP213-201ENST00000410746 298 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 AL161631.1-201ENST00000417933 486 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 OR1AA1P-201ENST00000419597 916 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD8P13378 AC093655.2-201ENST00000425735 631 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 RPS27P18-201ENST00000431701 247 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 TMEM183AP1-205ENST00000432739 290 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD8P13378 KRT8P51-201ENST00000438938 274 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 AC079781.2-201ENST00000446424 169 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXD8P13378 AC004980.3-201ENST00000447046 365 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 Y_RNA.639-201ENST00000458981 102 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 RN7SL808P-201ENST00000496066 299 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD8P13378 SNRPCP2-201ENST00000504370 475 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 Y_RNA.711-201ENST00000516993 102 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 HMGB1P40-201ENST00000525121 540 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AP003497.1-201ENST00000528472 562 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD8P13378 NCAPGP2-201ENST00000557911 754 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 HMGN2P47-201ENST00000559378 272 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC6.11□□□□□ -1.43
HOXD8P13378 AC019322.1-201ENST00000571869 389 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 MTND4LP32-201ENST00000636111 270 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.11□□□□□ -1.43
HOXD8P13378 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
HOXD8P13378 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 AC006020.1-201ENST00000420179 1854 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 OR55B1P-203ENST00000641518 2602 ntBASIC6.11□□□□□ -1.43
HOXD8P13378 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
HOXD8P13378 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
HOXD8P13378 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
HOXD8P13378 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.1□□□□□ -1.43
HOXD8P13378 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
HOXD8P13378 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD8P13378 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD8P13378 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.1□□□□□ -1.43
HOXD8P13378 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD8P13378 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
HOXD8P13378 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms