Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 YPEL5P3-201ENST00000547227 352 ntBASIC3.57□□□□□ -1.84
HCN1O60741 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.57□□□□□ -1.84
HCN1O60741 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.57□□□□□ -1.84
HCN1O60741 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.57□□□□□ -1.84
HCN1O60741 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.57□□□□□ -1.84
HCN1O60741 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HCN1O60741 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.57□□□□□ -1.84
HCN1O60741 AC026741.1-201ENST00000605892 482 ntBASIC3.57□□□□□ -1.84
HCN1O60741 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.57□□□□□ -1.84
HCN1O60741 AC096586.1-201ENST00000610267 561 ntBASIC3.57□□□□□ -1.84
HCN1O60741 MIR6864-201ENST00000617935 70 ntBASIC3.57□□□□□ -1.84
HCN1O60741 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
HCN1O60741 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN1O60741 SEC63P2-201ENST00000503863 1939 ntBASIC3.56□□□□□ -1.84
HCN1O60741 CEP170P1-201ENST00000502249 4587 ntBASIC3.56□□□□□ -1.84
HCN1O60741 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCN1O60741 MTCO1P4-201ENST00000520516 1409 ntBASIC3.56□□□□□ -1.84
HCN1O60741 SNORA31-201ENST00000362607 130 ntBASIC3.56□□□□□ -1.84
HCN1O60741 RNA5SP399-201ENST00000364003 117 ntBASIC3.56□□□□□ -1.84
HCN1O60741 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HCN1O60741 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN1O60741 AL359837.1-201ENST00000381357 287 ntBASIC3.56□□□□□ -1.84
HCN1O60741 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCN1O60741 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
HCN1O60741 HSPE1P26-201ENST00000405341 275 ntBASIC3.56□□□□□ -1.84
HCN1O60741 SNORA57.3-201ENST00000411095 141 ntBASIC3.56□□□□□ -1.84
HCN1O60741 BX664727.1-201ENST00000416024 466 ntBASIC3.56□□□□□ -1.84
HCN1O60741 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN1O60741 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN1O60741 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN1O60741 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN1O60741 RANP8-201ENST00000444720 713 ntBASIC3.56□□□□□ -1.84
HCN1O60741 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN1O60741 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.56□□□□□ -1.84
HCN1O60741 RPL29P29-201ENST00000448725 423 ntBASIC3.56□□□□□ -1.84
HCN1O60741 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN1O60741 DNAJC19P8-201ENST00000452887 259 ntBASIC3.56□□□□□ -1.84
HCN1O60741 MRPL35P4-201ENST00000453682 566 ntBASIC3.56□□□□□ -1.84
HCN1O60741 RPL32P14-201ENST00000463196 378 ntBASIC3.56□□□□□ -1.84
HCN1O60741 SETP6-201ENST00000479329 568 ntBASIC3.56□□□□□ -1.84
HCN1O60741 RN7SL323P-201ENST00000494712 295 ntBASIC3.56□□□□□ -1.84
HCN1O60741 MTCO2P9-201ENST00000503214 694 ntBASIC3.56□□□□□ -1.84
HCN1O60741 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.56□□□□□ -1.84
HCN1O60741 AC093755.1-201ENST00000512950 1023 ntBASIC3.56□□□□□ -1.84
HCN1O60741 RNU6-334P-201ENST00000517072 102 ntBASIC3.56□□□□□ -1.84
HCN1O60741 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.56□□□□□ -1.84
HCN1O60741 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN1O60741 AC010306.1-201ENST00000523223 1117 ntBASIC3.56□□□□□ -1.84
HCN1O60741 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN1O60741 AC113192.3-201ENST00000529152 742 ntBASIC3.56□□□□□ -1.84
HCN1O60741 OR5D17P-201ENST00000531492 978 ntBASIC3.56□□□□□ -1.84
HCN1O60741 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
HCN1O60741 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.56□□□□□ -1.84
HCN1O60741 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN1O60741 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.56□□□□□ -1.84
HCN1O60741 ZNF192P1-203ENST00000565888 810 ntBASIC3.56□□□□□ -1.84
HCN1O60741 MTND4LP25-201ENST00000570218 163 ntBASIC3.56□□□□□ -1.84
HCN1O60741 MIR3158-1-201ENST00000583596 81 ntBASIC3.56□□□□□ -1.84
HCN1O60741 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN1O60741 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC3.56□□□□□ -1.84
HCN1O60741 AC112230.1-201ENST00000604342 547 ntBASIC3.56□□□□□ -1.84
HCN1O60741 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.56□□□□□ -1.84
HCN1O60741 AC048347.1-201ENST00000624621 427 ntBASIC3.56□□□□□ -1.84
HCN1O60741 AP003400.6-201ENST00000624698 740 ntBASIC3.56□□□□□ -1.84
HCN1O60741 AF001550.2-201ENST00000636643 217 ntBASIC3.56□□□□□ -1.84
HCN1O60741 AC132825.7-201ENST00000638744 335 ntBASIC3.56□□□□□ -1.84
HCN1O60741 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
HCN1O60741 AC006504.1-201ENST00000562493 3666 ntBASIC3.56□□□□□ -1.84
HCN1O60741 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN1O60741 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN1O60741 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HCN1O60741 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HCN1O60741 FAM91A3P-201ENST00000456826 2544 ntBASIC3.55□□□□□ -1.84
HCN1O60741 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCN1O60741 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCN1O60741 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.55□□□□□ -1.84
HCN1O60741 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCN1O60741 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
HCN1O60741 AL122126.1-201ENST00000546905 1318 ntBASIC3.55□□□□□ -1.84
HCN1O60741 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCN1O60741 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCN1O60741 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
HCN1O60741 RNU6-328P-201ENST00000390887 106 ntBASIC3.55□□□□□ -1.84
HCN1O60741 PTMAP2-201ENST00000397627 327 ntBASIC3.55□□□□□ -1.84
HCN1O60741 AL590704.1-201ENST00000402856 794 ntBASIC3.55□□□□□ -1.84
HCN1O60741 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.55□□□□□ -1.84
HCN1O60741 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.55□□□□□ -1.84
HCN1O60741 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.55□□□□□ -1.84
HCN1O60741 OR5AW1P-201ENST00000426334 1006 ntBASIC3.55□□□□□ -1.84
HCN1O60741 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.55□□□□□ -1.84
HCN1O60741 AL035246.1-201ENST00000433554 1255 ntBASIC3.55□□□□□ -1.84
HCN1O60741 SKP1P1-201ENST00000438081 489 ntBASIC3.55□□□□□ -1.84
HCN1O60741 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.55□□□□□ -1.84
HCN1O60741 RPS17P13-201ENST00000448974 407 ntBASIC3.55□□□□□ -1.84
HCN1O60741 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.55□□□□□ -1.84
HCN1O60741 AC098824.1-201ENST00000453565 980 ntBASIC3.55□□□□□ -1.84
HCN1O60741 AC078785.3-201ENST00000476607 425 ntBASIC3.55□□□□□ -1.84
HCN1O60741 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.55□□□□□ -1.84
HCN1O60741 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HCN1O60741 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms