Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC090337.1-201ENST00000579651 2074 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 SNORA62.2-201ENST00000364672 152 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 SNORD3H-201ENST00000384486 214 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 U8.11-201ENST00000384699 133 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 U8.12-201ENST00000384701 133 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC126124.2-201ENST00000413542 321 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 Z99755.1-201ENST00000414048 380 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 HMGB3P5-201ENST00000428894 612 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 HSFY7P-201ENST00000432672 318 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 HSFY8P-201ENST00000437934 318 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 RNF2P1-201ENST00000442955 1010 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AL096829.2-201ENST00000446582 742 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC008264.1-201ENST00000447612 367 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC097262.1-201ENST00000452559 548 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 HSFY5P-201ENST00000453726 309 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 U8.18-201ENST00000459285 133 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC018635.1-201ENST00000468292 1030 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 RPL21P18-201ENST00000469899 480 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 UBE2CP3-201ENST00000502715 450 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 RN7SKP157-201ENST00000516174 282 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC104072.1-201ENST00000568817 668 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC083899.3-201ENST00000603413 594 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AL109618.2-201ENST00000605527 211 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AL391834.1-201ENST00000609609 560 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 AC099654.8-201ENST00000637757 681 ntBASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
TRIM49D1C9J1S8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 TCEA1P4-201ENST00000415066 844 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 KCTD10P1-201ENST00000434203 625 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 GXYLT1P1-201ENST00000446657 490 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AL157827.1-201ENST00000447622 132 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 PPIAP3-201ENST00000450588 505 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 RPL23AP23-201ENST00000452590 471 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 RPL32P14-201ENST00000463196 378 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC021205.1-201ENST00000468797 348 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC011037.1-201ENST00000483964 558 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 HMGB1P21-201ENST00000502313 581 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC104027.1-201ENST00000521887 300 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 C1DP5-201ENST00000525775 383 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC068339.2-201ENST00000534395 618 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 HSPE1P5-201ENST00000561489 272 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC106785.1-201ENST00000565935 262 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 MIR4458-201ENST00000578872 75 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 MIR5685-201ENST00000579080 79 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AP004372.1-201ENST00000604842 844 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC026790.2-201ENST00000606282 430 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC099676.1-201ENST00000608886 657 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC009269.6-201ENST00000621778 588 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AC092628.2-201ENST00000622492 339 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AL356118.1-201ENST00000635272 1078 ntBASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.43□□□□□ -1.86
TRIM49D1C9J1S8 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms