Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 AC007390.2-201ENST00000606229 3803 ntBASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
SSX2IPQ9Y2D8 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 ZNF833P-201ENST00000424938 1494 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 RNU1-94P-201ENST00000362627 173 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 RNU5D-1-201ENST00000363299 116 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 MT-TH-201ENST00000387441 69 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 E2F6P2-201ENST00000420708 748 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 RPL31P54-201ENST00000429803 370 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 DLGAP5P1-201ENST00000430307 464 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 NMNAT1P2-201ENST00000435192 860 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 RPS27AP15-201ENST00000447672 466 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 MTND2P19-201ENST00000449129 1012 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AC108463.1-201ENST00000450258 347 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 DDX39BP2-208ENST00000453923 258 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AC133473.1-201ENST00000455173 299 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 RPL7AP52-201ENST00000458096 790 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 RPL23AP24-201ENST00000458203 385 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AC109327.1-201ENST00000471666 403 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 RPS27P23-201ENST00000487608 251 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 DEFB109F-201ENST00000491870 277 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 MTCO2P32-201ENST00000514865 403 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AP001189.2-201ENST00000527320 189 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 HIGD1AP10-201ENST00000527837 282 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AC105129.1-201ENST00000560250 297 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AP001094.1-201ENST00000579805 193 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AC068790.6-201ENST00000602558 258 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AL020997.2-201ENST00000602607 184 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AC012409.3-201ENST00000611343 981 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AC005332.6-201ENST00000613178 446 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 AC124312.6-202ENST00000623624 418 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 SALL4P2-201ENST00000423288 2910 ntBASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SSX2IPQ9Y2D8 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 MTND4P34-201ENST00000572715 1371 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 Y_RNA.408-201ENST00000383987 102 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 RNU6-192P-201ENST00000391253 100 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 RPL21P108-201ENST00000413857 481 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 CEACAMP8-201ENST00000413902 580 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 MTCO3P41-201ENST00000414801 328 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 NPM1P11-201ENST00000417106 855 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 SKP1P3-201ENST00000429280 487 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 SCARNA10-201ENST00000459255 330 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 AC010618.1-201ENST00000469924 477 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 RN7SL810P-201ENST00000493031 276 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 SETP14-201ENST00000497538 873 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 STMN1P2-201ENST00000508435 439 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 ATP1B1P1-201ENST00000509767 915 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 AC109471.1-201ENST00000511631 612 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 SMARCE1P4-201ENST00000523647 241 ntBASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSX2IPQ9Y2D8 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms