Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.95□□□□□ -1.62
COL20A1Q9P218 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.95□□□□□ -1.62
COL20A1Q9P218 FP325313.1-201ENST00000638228 703 ntBASIC4.95□□□□□ -1.62
COL20A1Q9P218 SAMMSON-213ENST00000641336 1521 ntBASIC4.95□□□□□ -1.62
COL20A1Q9P218 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.95□□□□□ -1.62
COL20A1Q9P218 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
COL20A1Q9P218 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
COL20A1Q9P218 OR5BR1P-201ENST00000524992 1330 ntBASIC4.95□□□□□ -1.62
COL20A1Q9P218 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
COL20A1Q9P218 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL20A1Q9P218 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
COL20A1Q9P218 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 Y_RNA.18-201ENST00000362461 102 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 RNA5SP307-201ENST00000362863 116 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 Y_RNA.126-201ENST00000363382 111 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL20A1Q9P218 SNORA11-201ENST00000408789 128 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 RNU2-28P-201ENST00000410457 189 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 RN7SKP235-201ENST00000410662 305 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 RN7SKP182-201ENST00000410772 298 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 SNORA74C-2-201ENST00000411179 201 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 USP9YP33-201ENST00000412220 421 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL20A1Q9P218 BX119904.4-201ENST00000424402 301 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 VDAC1P6-201ENST00000430062 855 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 USP9YP35-201ENST00000435696 412 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 YWHAZP8-201ENST00000436935 731 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 MTCO1P48-201ENST00000448024 1096 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL20A1Q9P218 SLC31A1P1-201ENST00000451221 567 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 AC009963.2-201ENST00000453431 138 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 PARP4P3-201ENST00000510265 317 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 RNA5SP519-201ENST00000516480 119 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 NDUFAF4P1-201ENST00000559425 519 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL20A1Q9P218 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 Z98200.1-201ENST00000607298 470 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 AL359535.1-201ENST00000612100 1087 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 AL021997.2-201ENST00000615674 271 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 MIR6864-201ENST00000617935 70 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 AC007546.2-201ENST00000623996 360 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 AC098679.5-201ENST00000624394 571 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 RNA5SP196-201ENST00000625967 102 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL20A1Q9P218 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 CYP1D1P-201ENST00000416662 1433 ntBASIC4.94□□□□□ -1.62
COL20A1Q9P218 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
COL20A1Q9P218 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.94□□□□□ -1.62
COL20A1Q9P218 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.93□□□□□ -1.62
COL20A1Q9P218 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL20A1Q9P218 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL20A1Q9P218 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
COL20A1Q9P218 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL20A1Q9P218 AP001642.1-201ENST00000624727 2117 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 LINC00561-201ENST00000565815 2738 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL20A1Q9P218 RNA5SP391-201ENST00000363456 119 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 RN7SKP227-201ENST00000364445 330 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
COL20A1Q9P218 RNU1-13P-201ENST00000384499 162 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 SNORD96B-201ENST00000386148 79 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 RNA5SP36-201ENST00000410197 133 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 AC073264.1-201ENST00000411508 416 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 AL590609.2-201ENST00000421430 368 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 SDCBPP2-201ENST00000424643 885 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 AL158073.1-201ENST00000426848 1104 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.93□□□□□ -1.62
COL20A1Q9P218 ISCA1P2-201ENST00000438679 421 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 AC118469.1-201ENST00000442943 488 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 MTND2P4-201ENST00000445034 1004 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 AC009961.3-201ENST00000449832 765 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 AC112206.1-201ENST00000468416 477 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
COL20A1Q9P218 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
COL20A1Q9P218 AC005178.1-201ENST00000508392 440 ntBASIC4.93□□□□□ -1.62
COL20A1Q9P218 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.93□□□□□ -1.62
COL20A1Q9P218 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms