Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC010881.1-201ENST00000433830 235 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 CEACAMP7-201ENST00000444105 496 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 BMI1P1-201ENST00000445879 941 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 COX6CP12-201ENST00000446748 202 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AL592447.1-201ENST00000447592 540 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 SRRM1P2-201ENST00000464531 1192 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC013828.1-201ENST00000481845 158 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC011825.1-201ENST00000484967 388 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC113430.1-201ENST00000506872 718 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC007016.1-201ENST00000512110 244 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 RNU6-583P-201ENST00000516012 92 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 DEFB131D-201ENST00000526803 184 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 SERPINE4P-201ENST00000554978 281 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 CYCSP2-201ENST00000558168 301 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 MIR4443-201ENST00000585052 53 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 HMGB2P1-201ENST00000591146 634 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AL512782.1-201ENST00000603093 364 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 RNU6-88P-201ENST00000606801 100 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AL121890.2-201ENST00000617644 465 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 PABPC1P9-201ENST00000426076 1612 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 NXPH1-205ENST00000602349 1953 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 MTCO1P23-201ENST00000415223 1526 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 AC139769.1-204ENST00000472297 1931 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.7□□□□□ -1.66
ATG4AQ8WYN0 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 MAPK10-320ENST00000641462 6696 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC027514.1-201ENST00000588561 1603 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 SCN1A-220ENST00000641603 12506 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC021146.4-201ENST00000309229 279 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 FGF7P2-201ENST00000332473 296 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 RNU6-501P-201ENST00000364072 100 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 RNU6-444P-201ENST00000383988 108 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 SNORA75-201ENST00000384158 137 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 RNU6-517P-201ENST00000384362 110 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 RNU6-1215P-201ENST00000384441 102 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 PRRC2CP1-201ENST00000404428 159 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AL512430.2-201ENST00000406786 339 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 RNA5SP146-201ENST00000410743 123 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC092647.1-201ENST00000420654 287 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AL512649.1-201ENST00000428997 581 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 BMS1P19-201ENST00000433925 393 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC016831.4-201ENST00000438302 307 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC243772.1-201ENST00000451620 410 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 MTCYBP17-201ENST00000503579 789 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 KRT19P6-201ENST00000510983 209 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 RNA5SP216-201ENST00000516111 123 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC090151.1-201ENST00000520784 730 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC100770.1-201ENST00000532310 322 ntBASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.69□□□□□ -1.66
ATG4AQ8WYN0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms