Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 U4.1-201ENST00000620349 87 ntBASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHKBP1Q8TBC3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 Y_RNA.188-201ENST00000363952 111 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-777P-201ENST00000364265 104 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 MIR551A-201ENST00000385042 96 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 MT-TP-201ENST00000387461 68 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 CISD1P1-201ENST00000393907 327 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 MIR1305-201ENST00000408300 86 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC127391.1-201ENST00000411737 98 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC009302.1-201ENST00000417147 390 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 RPL7P59-201ENST00000447700 943 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 TRGVB-201ENST00000453257 471 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 RNU7-152P-201ENST00000458982 64 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 TRBV8-2-201ENST00000475637 270 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 RN7SL222P-201ENST00000476452 299 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC114797.1-201ENST00000514003 728 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-1334P-201ENST00000516032 105 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 Vault.3-201ENST00000516676 95 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC026464.5-201ENST00000562497 722 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 POLR3GP2-201ENST00000588366 668 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC087763.1-201ENST00000603391 286 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-87P-201ENST00000607561 108 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AL133173.2-201ENST00000614270 90 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC022106.2-201ENST00000620114 757 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 AC007342.5-201ENST00000571340 2142 ntBASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
SHKBP1Q8TBC3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 RIOK3P1-201ENST00000418778 1528 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 NACAP2-201ENST00000318548 624 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-1120P-201ENST00000362988 108 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-456P-201ENST00000384493 107 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 RNU6-308P-201ENST00000390957 107 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 RN7SKP266-201ENST00000410232 287 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AL136133.1-201ENST00000413694 376 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 COX6CP17-201ENST00000421389 185 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 CRIP1P1-201ENST00000427567 185 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 ATP5JP1-201ENST00000431631 322 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC012512.1-201ENST00000446594 718 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 REG1CP-206ENST00000447469 496 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 PPP1R2P5-201ENST00000457256 603 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC097493.1-201ENST00000463958 372 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 RN7SL826P-201ENST00000479724 288 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AC013356.1-201ENST00000489027 564 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 RPL38P4-201ENST00000502376 214 ntBASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.8□□□□□ -1.48
SHKBP1Q8TBC3 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms