Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AC092724.1-201ENST00000624623 3397 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AC092070.2-203ENST00000598377 3644 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AC244517.1-201ENST00000606030 2086 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 CASC19-204ENST00000641001 2055 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AL442639.1-201ENST00000625030 1899 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 SNORA43.1-201ENST00000364863 140 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RNY3P13-201ENST00000365542 102 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RNU4-2-201ENST00000365668 141 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 Y_RNA.493-201ENST00000384422 102 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RNU6-328P-201ENST00000390887 106 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 SNORA75.6-201ENST00000391318 127 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RNU6-101P-201ENST00000410323 104 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RNU4-25P-201ENST00000410569 230 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AL035422.1-201ENST00000414193 397 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 EIF4EP1-201ENST00000422311 642 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AC108479.1-201ENST00000431142 427 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AL451139.1-201ENST00000434718 346 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 TIMM9P1-201ENST00000436122 256 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RPL23AP74-201ENST00000437246 471 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RPL7P28-201ENST00000437739 740 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 PPIAP10-201ENST00000438675 458 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RPS27AP3-201ENST00000453803 454 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 PPP1R11P1-201ENST00000486095 376 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RPL12P30-201ENST00000488389 499 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 GZMAP1-201ENST00000503054 631 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 SLC25A15P5-201ENST00000508033 253 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 Y_RNA.710-201ENST00000516975 110 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 IGKV2-19-201ENST00000518132 283 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AC036111.2-201ENST00000533247 901 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RRN3P3-201ENST00000549207 578 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AL355480.1-201ENST00000629041 99 ntBASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
LYSMD3Q7Z3D4 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 Y_RNA.350-201ENST00000365409 98 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 RHOT1P2-201ENST00000366423 333 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 RNU6-472P-201ENST00000384299 107 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AL078604.1-201ENST00000404609 466 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AC116036.1-201ENST00000412199 367 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AC068533.1-201ENST00000418542 415 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AC008280.1-201ENST00000418851 412 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 PDSS1P1-201ENST00000422953 1114 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 MED13P1-201ENST00000428342 171 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AC079807.1-201ENST00000429993 481 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 CBX1P4-201ENST00000439415 457 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 MED28P3-201ENST00000444288 531 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 RN7SL254P-201ENST00000460609 284 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AC004801.2-202ENST00000463559 283 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 RNU6-1016P-201ENST00000516689 94 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 RPA2P3-201ENST00000533268 770 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AC006512.2-201ENST00000543250 486 ntBASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.23□□□□□ -1.41
LYSMD3Q7Z3D4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms