Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 TVP23BP2-201ENST00000455082 615 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 FTH1P2-201ENST00000466086 412 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AC090543.1-201ENST00000492168 485 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AC090071.1-201ENST00000507713 644 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 ARL2BPP6-201ENST00000512757 439 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 MIR4425-201ENST00000580572 84 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AC245389.1-201ENST00000605141 529 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 AC079791.1-201ENST00000605356 973 ntBASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
PTPN20Q4JDL3 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 AP002088.1-201ENST00000382740 395 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 MIR490-201ENST00000384865 128 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 AL589655.1-201ENST00000405398 482 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 AL138799.3-201ENST00000438968 350 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 RPL26P28-201ENST00000451325 435 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 RPL12P26-201ENST00000452430 487 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 MTND3P4-201ENST00000453537 303 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 RPS20P32-201ENST00000456044 356 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 AC078817.1-201ENST00000492623 435 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 OR8I1P-201ENST00000529291 931 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 Z82195.1-201ENST00000604558 398 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 AC100814.1-201ENST00000606963 623 ntBASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PTPN20Q4JDL3 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.59□□□□□ -1.84
PTPN20Q4JDL3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 RNA5SP391-201ENST00000363456 119 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 ATP5F1P3-201ENST00000397213 657 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC105402.1-201ENST00000413336 545 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 RPL23AP82-202ENST00000427528 469 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC114878.1-201ENST00000441166 358 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 ARL5AP2-201ENST00000444698 533 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC097262.1-201ENST00000452559 548 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 HMGB3P30-201ENST00000457863 606 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 CENPBD1P1-201ENST00000464061 469 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC091564.1-201ENST00000464563 479 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC021205.2-201ENST00000480069 347 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC006499.5-201ENST00000505037 514 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC110768.1-201ENST00000509222 400 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC107934.2-201ENST00000518653 310 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AL049870.4-201ENST00000555741 486 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 U3.45-201ENST00000607547 219 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 RMST_8.1-201ENST00000610287 165 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 CR589904.2-201ENST00000612533 440 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AL391261.4-201ENST00000616012 481 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 DDX6P1-205ENST00000441966 1436 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 AC058791.1-201ENST00000608412 3198 ntBASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PTPN20Q4JDL3 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PTPN20Q4JDL3 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.57□□□□□ -1.84
PTPN20Q4JDL3 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms