Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 CYCSP35-201ENST00000451978 304 ntBASIC2.01□□□□□ -2.09
RPL39P62891 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.01□□□□□ -2.09
RPL39P62891 AC091179.1-201ENST00000461606 579 ntBASIC2.01□□□□□ -2.09
RPL39P62891 AC008571.1-201ENST00000467232 300 ntBASIC2.01□□□□□ -2.09
RPL39P62891 AC034236.1-201ENST00000469891 373 ntBASIC2.01□□□□□ -2.09
RPL39P62891 SEPT7P6-201ENST00000469999 1143 ntBASIC2.01□□□□□ -2.09
RPL39P62891 SNORA9.3-201ENST00000516383 129 ntBASIC2.01□□□□□ -2.09
RPL39P62891 RNU1-45P-201ENST00000517191 141 ntBASIC2.01□□□□□ -2.09
RPL39P62891 IGKV3OR22-2-201ENST00000517943 313 ntBASIC2.01□□□□□ -2.09
RPL39P62891 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.01□□□□□ -2.09
RPL39P62891 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.01□□□□□ -2.09
RPL39P62891 AC084824.1-201ENST00000550917 1005 ntBASIC2.01□□□□□ -2.09
RPL39P62891 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC2.01□□□□□ -2.09
RPL39P62891 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.01□□□□□ -2.09
RPL39P62891 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.01□□□□□ -2.09
RPL39P62891 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC2.01□□□□□ -2.09
RPL39P62891 AC007566.2-201ENST00000603642 413 ntBASIC2.01□□□□□ -2.09
RPL39P62891 AC005046.1-201ENST00000608515 625 ntBASIC2.01□□□□□ -2.09
RPL39P62891 OR2BH1P-201ENST00000608850 864 ntBASIC2.01□□□□□ -2.09
RPL39P62891 AL162574.2-201ENST00000614618 657 ntBASIC2.01□□□□□ -2.09
RPL39P62891 MIR8058-201ENST00000615737 89 ntBASIC2.01□□□□□ -2.09
RPL39P62891 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.01□□□□□ -2.09
RPL39P62891 AC015908.5-201ENST00000623289 343 ntBASIC2.01□□□□□ -2.09
RPL39P62891 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
RPL39P62891 AC024341.1-201ENST00000526444 1552 ntBASIC2.01□□□□□ -2.09
RPL39P62891 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.01□□□□□ -2.09
RPL39P62891 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
RPL39P62891 AL035425.3-201ENST00000564206 4996 ntBASIC2□□□□□ -2.09
RPL39P62891 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2□□□□□ -2.09
RPL39P62891 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2□□□□□ -2.09
RPL39P62891 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2□□□□□ -2.09
RPL39P62891 SNORA9.2-201ENST00000365361 133 ntBASIC2□□□□□ -2.09
RPL39P62891 RN7SKP202-201ENST00000410439 330 ntBASIC2□□□□□ -2.09
RPL39P62891 AC004987.3-201ENST00000413879 771 ntBASIC2□□□□□ -2.09
RPL39P62891 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC2□□□□□ -2.09
RPL39P62891 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2□□□□□ -2.09
RPL39P62891 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2□□□□□ -2.09
RPL39P62891 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2□□□□□ -2.09
RPL39P62891 LAMTOR5P1-201ENST00000444290 270 ntBASIC2□□□□□ -2.09
RPL39P62891 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2□□□□□ -2.09
RPL39P62891 AC003982.1-202ENST00000469928 248 ntBASIC2□□□□□ -2.09
RPL39P62891 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2□□□□□ -2.09
RPL39P62891 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2□□□□□ -2.09
RPL39P62891 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2□□□□□ -2.09
RPL39P62891 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2□□□□□ -2.09
RPL39P62891 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2□□□□□ -2.09
RPL39P62891 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2□□□□□ -2.09
RPL39P62891 MIR4700-201ENST00000578311 74 ntBASIC2□□□□□ -2.09
RPL39P62891 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2□□□□□ -2.09
RPL39P62891 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2□□□□□ -2.09
RPL39P62891 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2□□□□□ -2.09
RPL39P62891 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC2□□□□□ -2.09
RPL39P62891 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2□□□□□ -2.09
RPL39P62891 AC039056.2-201ENST00000622261 511 ntBASIC2□□□□□ -2.09
RPL39P62891 AC012442.3-202ENST00000636742 206 ntBASIC2□□□□□ -2.09
RPL39P62891 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2□□□□□ -2.09
RPL39P62891 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2□□□□□ -2.09
RPL39P62891 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2□□□□□ -2.09
RPL39P62891 AC117529.2-201ENST00000512159 2068 ntBASIC2□□□□□ -2.09
RPL39P62891 AC000367.1-201ENST00000452711 1766 ntBASIC2□□□□□ -2.09
RPL39P62891 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2□□□□□ -2.09
RPL39P62891 AC119744.1-201ENST00000454746 1715 ntBASIC2□□□□□ -2.09
RPL39P62891 AC091152.2-201ENST00000591628 2569 ntBASIC2□□□□□ -2.09
RPL39P62891 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC2□□□□□ -2.09
RPL39P62891 AC138915.3-201ENST00000562908 1389 ntBASIC1.99□□□□□ -2.09
RPL39P62891 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPL39P62891 AC092593.1-201ENST00000515413 1815 ntBASIC1.99□□□□□ -2.09
RPL39P62891 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC1.99□□□□□ -2.09
RPL39P62891 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
RPL39P62891 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPL39P62891 SNORA54-201ENST00000384281 123 ntBASIC1.99□□□□□ -2.09
RPL39P62891 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPL39P62891 AL031121.1-201ENST00000406553 254 ntBASIC1.99□□□□□ -2.09
RPL39P62891 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC1.99□□□□□ -2.09
RPL39P62891 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPL39P62891 MTCO1P52-201ENST00000433928 531 ntBASIC1.99□□□□□ -2.09
RPL39P62891 GOT2P5-201ENST00000433995 546 ntBASIC1.99□□□□□ -2.09
RPL39P62891 RPL23AP74-201ENST00000437246 471 ntBASIC1.99□□□□□ -2.09
RPL39P62891 AL590399.6-201ENST00000446396 307 ntBASIC1.99□□□□□ -2.09
RPL39P62891 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPL39P62891 CEACAMP10-202ENST00000495431 496 ntBASIC1.99□□□□□ -2.09
RPL39P62891 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC1.99□□□□□ -2.09
RPL39P62891 HPRT1P3-201ENST00000539521 576 ntBASIC1.99□□□□□ -2.09
RPL39P62891 AL157394.1-201ENST00000562983 1224 ntBASIC1.99□□□□□ -2.09
RPL39P62891 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.99□□□□□ -2.09
RPL39P62891 AC092354.2-201ENST00000607786 514 ntBASIC1.99□□□□□ -2.09
RPL39P62891 MIR6748-201ENST00000610433 71 ntBASIC1.99□□□□□ -2.09
RPL39P62891 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC1.99□□□□□ -2.09
RPL39P62891 5S_rRNA.12-201ENST00000617631 107 ntBASIC1.99□□□□□ -2.09
RPL39P62891 RFC1-217ENST00000639695 867 ntTSL 5 BASIC1.99□□□□□ -2.09
RPL39P62891 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
RPL39P62891 AC021755.1-201ENST00000559747 1447 ntBASIC1.99□□□□□ -2.09
RPL39P62891 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.99□□□□□ -2.09
RPL39P62891 AC092447.7-201ENST00000422212 1621 ntBASIC1.99□□□□□ -2.09
RPL39P62891 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPL39P62891 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
RPL39P62891 SNORA26.7-201ENST00000391288 122 ntBASIC1.98□□□□□ -2.09
RPL39P62891 RNU4-47P-201ENST00000410876 114 ntBASIC1.98□□□□□ -2.09
RPL39P62891 CBX1P3-201ENST00000413296 527 ntBASIC1.98□□□□□ -2.09
RPL39P62891 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms