Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 SNORD46.1-201ENST00000364139 104 ntBASIC3.4□□□□□ -1.87
VSX2P58304 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
VSX2P58304 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.4□□□□□ -1.87
VSX2P58304 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.4□□□□□ -1.87
VSX2P58304 RNU2-65P-201ENST00000410162 185 ntBASIC3.4□□□□□ -1.87
VSX2P58304 ARL2BPP3-201ENST00000421226 480 ntBASIC3.4□□□□□ -1.87
VSX2P58304 RPL21P109-201ENST00000422213 475 ntBASIC3.4□□□□□ -1.87
VSX2P58304 MTND4P24-201ENST00000424002 397 ntBASIC3.4□□□□□ -1.87
VSX2P58304 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.4□□□□□ -1.87
VSX2P58304 MOB1AP1-201ENST00000430903 535 ntBASIC3.4□□□□□ -1.87
VSX2P58304 MRPS18BP2-201ENST00000434310 759 ntBASIC3.4□□□□□ -1.87
VSX2P58304 RPL21P23-201ENST00000446654 460 ntBASIC3.4□□□□□ -1.87
VSX2P58304 TPRKBP1-201ENST00000456243 481 ntBASIC3.4□□□□□ -1.87
VSX2P58304 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.4□□□□□ -1.87
VSX2P58304 AC110768.1-201ENST00000509222 400 ntBASIC3.4□□□□□ -1.87
VSX2P58304 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.4□□□□□ -1.87
VSX2P58304 SNORA31.13-201ENST00000516624 135 ntBASIC3.4□□□□□ -1.87
VSX2P58304 SOD1P3-201ENST00000518682 454 ntBASIC3.4□□□□□ -1.87
VSX2P58304 DUXAP2-201ENST00000519198 589 ntBASIC3.4□□□□□ -1.87
VSX2P58304 IGKV2-36-201ENST00000519999 223 ntBASIC3.4□□□□□ -1.87
VSX2P58304 CCNG2P1-201ENST00000549521 1000 ntBASIC3.4□□□□□ -1.87
VSX2P58304 CKS1BP1-201ENST00000555221 240 ntBASIC3.4□□□□□ -1.87
VSX2P58304 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.4□□□□□ -1.87
VSX2P58304 MIR5047-201ENST00000579212 100 ntBASIC3.4□□□□□ -1.87
VSX2P58304 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
VSX2P58304 CBX3P2-202ENST00000583365 535 ntBASIC3.4□□□□□ -1.87
VSX2P58304 AC069200.1-201ENST00000609511 323 ntBASIC3.4□□□□□ -1.87
VSX2P58304 AL592295.2-201ENST00000612578 206 ntBASIC3.4□□□□□ -1.87
VSX2P58304 RNVU1-4-201ENST00000612985 164 ntBASIC3.4□□□□□ -1.87
VSX2P58304 AC003001.2-201ENST00000616294 831 ntBASIC3.4□□□□□ -1.87
VSX2P58304 AL162233.1-201ENST00000620014 944 ntBASIC3.4□□□□□ -1.87
VSX2P58304 AP003355.3-201ENST00000623465 114 ntBASIC3.4□□□□□ -1.87
VSX2P58304 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.4□□□□□ -1.87
VSX2P58304 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.4□□□□□ -1.87
VSX2P58304 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
VSX2P58304 OR6C71P-202ENST00000641886 1107 ntBASIC3.4□□□□□ -1.87
VSX2P58304 AC000367.1-201ENST00000452711 1766 ntBASIC3.4□□□□□ -1.87
VSX2P58304 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VSX2P58304 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
VSX2P58304 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
VSX2P58304 AL365440.1-201ENST00000436135 2167 ntBASIC3.39□□□□□ -1.87
VSX2P58304 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VSX2P58304 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VSX2P58304 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VSX2P58304 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VSX2P58304 MIR142-201ENST00000384835 87 ntBASIC3.39□□□□□ -1.87
VSX2P58304 MIR184-201ENST00000384962 84 ntBASIC3.39□□□□□ -1.87
VSX2P58304 RPS3AP25-201ENST00000411660 793 ntBASIC3.39□□□□□ -1.87
VSX2P58304 XKRYP4-201ENST00000414395 483 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AC093578.1-201ENST00000415219 368 ntBASIC3.39□□□□□ -1.87
VSX2P58304 BX842559.1-201ENST00000419615 532 ntBASIC3.39□□□□□ -1.87
VSX2P58304 SDCBPP2-201ENST00000424643 885 ntBASIC3.39□□□□□ -1.87
VSX2P58304 CYCSP4-201ENST00000429682 331 ntBASIC3.39□□□□□ -1.87
VSX2P58304 ZNF965P-201ENST00000432501 817 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.39□□□□□ -1.87
VSX2P58304 XKRYP5-201ENST00000449659 483 ntBASIC3.39□□□□□ -1.87
VSX2P58304 MTND5P8-201ENST00000449817 1083 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.39□□□□□ -1.87
VSX2P58304 CFTRP1-201ENST00000456646 183 ntBASIC3.39□□□□□ -1.87
VSX2P58304 SNORD108-201ENST00000459332 71 ntBASIC3.39□□□□□ -1.87
VSX2P58304 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.39□□□□□ -1.87
VSX2P58304 AC078785.3-201ENST00000476607 425 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AL049830.2-201ENST00000480072 201 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.39□□□□□ -1.87
VSX2P58304 AC010285.3-201ENST00000511668 676 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.39□□□□□ -1.87
VSX2P58304 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.39□□□□□ -1.87
VSX2P58304 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.39□□□□□ -1.87
VSX2P58304 AC008489.1-201ENST00000524271 483 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AC103843.2-201ENST00000530523 682 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AP000619.3-201ENST00000535634 1127 ntBASIC3.39□□□□□ -1.87
VSX2P58304 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.39□□□□□ -1.87
VSX2P58304 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.39□□□□□ -1.87
VSX2P58304 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.39□□□□□ -1.87
VSX2P58304 AC067852.4-201ENST00000590314 478 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.39□□□□□ -1.87
VSX2P58304 AC115621.1-201ENST00000604653 858 ntBASIC3.39□□□□□ -1.87
VSX2P58304 MIR7851-201ENST00000610611 160 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AC019176.2-201ENST00000611579 315 ntBASIC3.39□□□□□ -1.87
VSX2P58304 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
VSX2P58304 AC244258.1-201ENST00000637553 1071 ntBASIC3.39□□□□□ -1.87
VSX2P58304 AL392088.2-201ENST00000637607 285 ntBASIC3.39□□□□□ -1.87
VSX2P58304 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.39□□□□□ -1.87
VSX2P58304 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VSX2P58304 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.39□□□□□ -1.87
VSX2P58304 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
VSX2P58304 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.39□□□□□ -1.87
VSX2P58304 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 AC025125.1-201ENST00000624743 1922 ntBASIC3.38□□□□□ -1.87
VSX2P58304 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.38□□□□□ -1.87
VSX2P58304 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 AC073073.2-201ENST00000609827 2578 ntBASIC3.38□□□□□ -1.87
VSX2P58304 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
VSX2P58304 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms