Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HDAC4P56524 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HDAC4P56524 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.51□□□□□ -1.69
HDAC4P56524 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 AC090229.1-201ENST00000590983 1609 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 EIF2AP4-201ENST00000424793 1781 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 RNU6-839P-201ENST00000363347 108 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 RNU1-85P-201ENST00000364127 164 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 U3.22-201ENST00000391120 215 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.51□□□□□ -1.69
HDAC4P56524 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 HIGD1AP4-201ENST00000430194 280 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 COX7BP2-201ENST00000437976 242 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.51□□□□□ -1.69
HDAC4P56524 AL353748.1-201ENST00000440753 474 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 PHBP16-201ENST00000446318 950 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 COX6CP18-201ENST00000448769 222 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 NECAP1P2-201ENST00000455668 727 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.51□□□□□ -1.69
HDAC4P56524 RPL23AP24-201ENST00000458203 385 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.51□□□□□ -1.69
HDAC4P56524 VPS26AP1-201ENST00000483197 979 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 RN7SL810P-201ENST00000493031 276 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 AC034244.1-201ENST00000507687 207 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 PPBPP1-201ENST00000510807 373 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.51□□□□□ -1.69
HDAC4P56524 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.51□□□□□ -1.69
HDAC4P56524 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 PTP4A1P6-201ENST00000531034 478 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.51□□□□□ -1.69
HDAC4P56524 TRAV8-5-201ENST00000537369 341 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC4.51□□□□□ -1.69
HDAC4P56524 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.51□□□□□ -1.69
HDAC4P56524 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.51□□□□□ -1.69
HDAC4P56524 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 AP003973.1-201ENST00000604639 691 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 uc_338.32-201ENST00000615087 172 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 AC019278.1-201ENST00000623516 479 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 AC124312.6-202ENST00000623624 418 ntBASIC4.51□□□□□ -1.69
HDAC4P56524 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
HDAC4P56524 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HDAC4P56524 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
HDAC4P56524 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
HDAC4P56524 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
HDAC4P56524 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.51□□□□□ -1.69
HDAC4P56524 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
HDAC4P56524 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HDAC4P56524 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HDAC4P56524 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HDAC4P56524 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
HDAC4P56524 DCAF13P3-201ENST00000561147 1334 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 AC010300.1-201ENST00000600671 5134 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
HDAC4P56524 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HDAC4P56524 RNA5SP175-201ENST00000364275 119 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
HDAC4P56524 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.5□□□□□ -1.69
HDAC4P56524 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.5□□□□□ -1.69
HDAC4P56524 MTND4P22-201ENST00000413116 1169 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 AC004987.3-201ENST00000413879 771 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 AC007435.1-201ENST00000421086 415 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 AC073335.1-201ENST00000427776 363 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.5□□□□□ -1.69
HDAC4P56524 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.5□□□□□ -1.69
HDAC4P56524 MTCO1P54-201ENST00000430139 712 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.5□□□□□ -1.69
HDAC4P56524 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.5□□□□□ -1.69
HDAC4P56524 AC073143.1-201ENST00000436316 395 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 RPL7P28-201ENST00000437739 740 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.5□□□□□ -1.69
HDAC4P56524 AC079804.1-201ENST00000461922 436 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.5□□□□□ -1.69
HDAC4P56524 AC126121.1-201ENST00000482313 553 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 AC020593.1-201ENST00000507399 299 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 RNA5SP135-201ENST00000517019 125 ntBASIC4.5□□□□□ -1.69
HDAC4P56524 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.5□□□□□ -1.69
HDAC4P56524 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.5□□□□□ -1.69
HDAC4P56524 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.5□□□□□ -1.69
HDAC4P56524 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.5□□□□□ -1.69
HDAC4P56524 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HDAC4P56524 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC4.5□□□□□ -1.69
HDAC4P56524 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.5□□□□□ -1.69
HDAC4P56524 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms