Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PKNOX1P55347 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.53□□□□□ -1.84
PKNOX1P55347 AL049693.1-201ENST00000402760 611 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 PTGES3P2-201ENST00000407942 482 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.53□□□□□ -1.84
PKNOX1P55347 USP9YP31-201ENST00000431405 881 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 RPL17P35-201ENST00000432217 549 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 RPL37P1-201ENST00000432310 284 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.53□□□□□ -1.84
PKNOX1P55347 AL645931.1-201ENST00000439737 410 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX1P55347 HMGB1P48-201ENST00000446155 598 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 AL035407.2-201ENST00000454090 378 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 RPL21P47-201ENST00000483696 477 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC3.53□□□□□ -1.84
PKNOX1P55347 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.53□□□□□ -1.84
PKNOX1P55347 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.53□□□□□ -1.84
PKNOX1P55347 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 MTCO1P35-201ENST00000515270 228 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 RN7SKP60-201ENST00000516985 239 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 RN7SKP234-201ENST00000517173 224 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 MIR2116-201ENST00000517221 80 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 AP000916.1-201ENST00000533869 835 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 AC011602.1-201ENST00000546484 331 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 AC023161.2-201ENST00000551218 780 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.53□□□□□ -1.84
PKNOX1P55347 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 RNU1-30P-201ENST00000606575 163 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 AC006213.5-201ENST00000619673 288 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 AP003400.6-201ENST00000624698 740 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.53□□□□□ -1.84
PKNOX1P55347 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.53□□□□□ -1.84
PKNOX1P55347 U6.98-201ENST00000637157 84 ntBASIC3.53□□□□□ -1.84
PKNOX1P55347 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.53□□□□□ -1.84
PKNOX1P55347 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PKNOX1P55347 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.52□□□□□ -1.85
PKNOX1P55347 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PKNOX1P55347 DCAF13P1-201ENST00000495256 1330 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PKNOX1P55347 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PKNOX1P55347 RNA5SP283-201ENST00000365604 119 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AP002088.1-201ENST00000382740 395 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 MIR30B-201ENST00000384850 88 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 ATP5F1P6-201ENST00000402768 767 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 PPIAP31-201ENST00000405422 495 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 U3.39-201ENST00000408569 239 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AC019070.1-201ENST00000415008 1024 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AL606495.1-201ENST00000422100 813 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AC093422.3-201ENST00000428506 305 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 RPS26P30-201ENST00000443431 335 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 DNAJC19P8-201ENST00000452887 259 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AL133162.1-201ENST00000463228 453 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AP000873.1-201ENST00000463987 400 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AC146507.1-201ENST00000468335 354 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 TMED11P-201ENST00000479478 690 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AC110768.1-201ENST00000509222 400 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AC005351.1-201ENST00000511152 786 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 RNU2-27P-201ENST00000516185 142 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AL139174.1-201ENST00000531489 886 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AGGF1P6-201ENST00000569213 976 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.52□□□□□ -1.85
PKNOX1P55347 AC053481.4-201ENST00000583164 216 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AL590392.1-201ENST00000604960 446 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AC005972.3-201ENST00000606304 481 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 AC022079.2-201ENST00000619739 566 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
PKNOX1P55347 RNA5SP196-201ENST00000625967 102 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKNOX1P55347 AC007656.2-201ENST00000624902 4547 ntBASIC3.52□□□□□ -1.85
PKNOX1P55347 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.52□□□□□ -1.85
PKNOX1P55347 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.52□□□□□ -1.85
PKNOX1P55347 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PKNOX1P55347 AL512283.1-201ENST00000606756 1384 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PKNOX1P55347 OTUD4P1-201ENST00000237841 3067 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PKNOX1P55347 AL512646.1-201ENST00000269395 1077 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 MIR30E-201ENST00000362104 92 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 RNA5SP167-201ENST00000365461 116 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 RNU6-481P-201ENST00000384194 107 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 SNORA70E-201ENST00000384492 135 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 MIR153-1-201ENST00000384914 90 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 PRRC2CP1-201ENST00000404428 159 ntBASIC3.51□□□□□ -1.85
PKNOX1P55347 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.51□□□□□ -1.85
PKNOX1P55347 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms