Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RHOT1P2-201ENST00000366423 333 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 U3.39-201ENST00000408569 239 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGCS2P54868 RPS6P14-201ENST00000425165 719 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGCS2P54868 AC006994.1-201ENST00000438212 839 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 AC127537.2-201ENST00000439258 465 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGCS2P54868 AL162388.1-201ENST00000450912 352 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 HMGB1P5-202ENST00000451497 985 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 AP001486.1-201ENST00000463339 476 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 AC023598.1-201ENST00000472521 361 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 AC010683.1-201ENST00000473673 378 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 AL049873.1-201ENST00000480540 376 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 AC092902.1-201ENST00000486999 259 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGCS2P54868 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.02□□□□□ -1.77
HMGCS2P54868 AC113192.3-201ENST00000529152 742 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.02□□□□□ -1.77
HMGCS2P54868 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.02□□□□□ -1.77
HMGCS2P54868 CBX3P2-202ENST00000583365 535 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 EIF1P6-201ENST00000600054 334 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 AC125494.3-201ENST00000602759 455 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 CR392039.4-201ENST00000624968 501 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS2P54868 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS2P54868 Z73965.1-201ENST00000623412 2297 ntBASIC4.02□□□□□ -1.77
HMGCS2P54868 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS2P54868 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS2P54868 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HMGCS2P54868 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
HMGCS2P54868 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS2P54868 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS2P54868 RNU6-252P-201ENST00000363232 107 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 RNU6-984P-201ENST00000363236 109 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS2P54868 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS2P54868 TAF9BP2-201ENST00000400856 499 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 ATP5F1P6-201ENST00000402768 767 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AL122016.1-201ENST00000403365 367 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 MTND4P22-201ENST00000413116 1169 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGCS2P54868 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGCS2P54868 Z75741.1-201ENST00000446793 314 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AL671855.1-201ENST00000446875 1203 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.01□□□□□ -1.77
HMGCS2P54868 RPL21P13-201ENST00000488305 481 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AC069499.1-201ENST00000489433 509 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGCS2P54868 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS2P54868 FCF1P8-201ENST00000510322 597 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 SNORD116-26-201ENST00000516006 96 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 RNA5SP154-201ENST00000516193 111 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.01□□□□□ -1.77
HMGCS2P54868 AC008083.2-201ENST00000546707 476 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS2P54868 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGCS2P54868 MIR4276-201ENST00000584832 70 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGCS2P54868 KLKP1-201ENST00000595979 403 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.01□□□□□ -1.77
HMGCS2P54868 AC233309.1-201ENST00000619522 751 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 AP006248.2-201ENST00000623309 592 ntBASIC4.01□□□□□ -1.77
HMGCS2P54868 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS2P54868 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGCS2P54868 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.01□□□□□ -1.77
HMGCS2P54868 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
HMGCS2P54868 ZNF90P1-201ENST00000480493 1951 ntBASIC4□□□□□ -1.77
HMGCS2P54868 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGCS2P54868 SNORD74.4-201ENST00000364129 80 ntBASIC4□□□□□ -1.77
HMGCS2P54868 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGCS2P54868 HSPD1P16-201ENST00000402302 394 ntBASIC4□□□□□ -1.77
HMGCS2P54868 HSPE1P8-201ENST00000406997 288 ntBASIC4□□□□□ -1.77
HMGCS2P54868 RPL31P52-201ENST00000407532 367 ntBASIC4□□□□□ -1.77
HMGCS2P54868 RNU4-27P-201ENST00000410889 139 ntBASIC4□□□□□ -1.77
HMGCS2P54868 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4□□□□□ -1.77
HMGCS2P54868 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4□□□□□ -1.77
HMGCS2P54868 MTCO2P1-201ENST00000424648 477 ntBASIC4□□□□□ -1.77
HMGCS2P54868 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4□□□□□ -1.77
HMGCS2P54868 RPL23AP23-201ENST00000452590 471 ntBASIC4□□□□□ -1.77
HMGCS2P54868 ANP32BP2-201ENST00000454525 545 ntBASIC4□□□□□ -1.77
HMGCS2P54868 RN7SL594P-201ENST00000470590 287 ntBASIC4□□□□□ -1.77
HMGCS2P54868 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HMGCS2P54868 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4□□□□□ -1.77
HMGCS2P54868 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4□□□□□ -1.77
HMGCS2P54868 AC108120.2-201ENST00000512973 294 ntBASIC4□□□□□ -1.77
HMGCS2P54868 RNU6-1308P-201ENST00000516817 103 ntBASIC4□□□□□ -1.77
HMGCS2P54868 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4□□□□□ -1.77
HMGCS2P54868 MTND5P21-201ENST00000531961 522 ntBASIC4□□□□□ -1.77
HMGCS2P54868 OSBPL9P3-201ENST00000534523 595 ntBASIC4□□□□□ -1.77
HMGCS2P54868 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4□□□□□ -1.77
HMGCS2P54868 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC4□□□□□ -1.77
HMGCS2P54868 AC025918.2-201ENST00000558683 763 ntBASIC4□□□□□ -1.77
HMGCS2P54868 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4□□□□□ -1.77
HMGCS2P54868 ABI1P1-201ENST00000603375 1120 ntBASIC4□□□□□ -1.77
HMGCS2P54868 AC120053.1-201ENST00000607706 736 ntBASIC4□□□□□ -1.77
HMGCS2P54868 AP001033.2-201ENST00000609701 1003 ntBASIC4□□□□□ -1.77
HMGCS2P54868 LINC00901.1-201ENST00000617252 152 ntBASIC4□□□□□ -1.77
HMGCS2P54868 AC009237.17-201ENST00000618111 748 ntBASIC4□□□□□ -1.77
HMGCS2P54868 AL391262.2-201ENST00000622466 494 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms