Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 POU5F1P7-201ENST00000508759 541 ntBASIC4.22□□□□□ -1.73
SOX2P48431 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 RNA5SP43-201ENST00000516559 110 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 AP004247.1-201ENST00000531556 1289 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX2P48431 OR6C73P-201ENST00000546432 358 ntBASIC4.22□□□□□ -1.73
SOX2P48431 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC4.22□□□□□ -1.73
SOX2P48431 AC063949.1-201ENST00000552900 865 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AL049839.1-201ENST00000556151 657 ntBASIC4.22□□□□□ -1.73
SOX2P48431 ZNF519P3-201ENST00000557158 1032 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC079075.1-201ENST00000559543 878 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
SOX2P48431 AL133457.1-201ENST00000564251 987 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 TVP23CP2-201ENST00000571473 623 ntBASIC4.22□□□□□ -1.73
SOX2P48431 MIR3614-201ENST00000581261 86 ntBASIC4.22□□□□□ -1.73
SOX2P48431 MAGOH2P-202ENST00000584384 429 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AL133338.2-201ENST00000604292 736 ntBASIC4.22□□□□□ -1.73
SOX2P48431 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC008498.1-201ENST00000613012 531 ntBASIC4.22□□□□□ -1.73
SOX2P48431 MIR6864-201ENST00000617935 70 ntBASIC4.22□□□□□ -1.73
SOX2P48431 AC093591.3-201ENST00000634516 308 ntBASIC4.22□□□□□ -1.73
SOX2P48431 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.22□□□□□ -1.73
SOX2P48431 OR52B5P-202ENST00000641118 1110 ntBASIC4.22□□□□□ -1.73
SOX2P48431 CASC19-264ENST00000641912 1184 ntBASIC4.22□□□□□ -1.73
SOX2P48431 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.22□□□□□ -1.73
SOX2P48431 ASNSP1-201ENST00000518311 1939 ntBASIC4.22□□□□□ -1.73
SOX2P48431 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SOX2P48431 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SOX2P48431 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SOX2P48431 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SOX2P48431 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SOX2P48431 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SOX2P48431 AC090971.4-201ENST00000560291 1800 ntBASIC4.21□□□□□ -1.74
SOX2P48431 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.21□□□□□ -1.74
SOX2P48431 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX2P48431 Y_RNA.97-201ENST00000363094 102 ntBASIC4.21□□□□□ -1.74
SOX2P48431 RNA5SP455-201ENST00000365190 119 ntBASIC4.21□□□□□ -1.74
SOX2P48431 RNU5E-5P-201ENST00000365379 116 ntBASIC4.21□□□□□ -1.74
SOX2P48431 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX2P48431 SNORA51.6-201ENST00000384151 125 ntBASIC4.21□□□□□ -1.74
SOX2P48431 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX2P48431 AC136624.1-201ENST00000400791 413 ntBASIC4.21□□□□□ -1.74
SOX2P48431 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX2P48431 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.21□□□□□ -1.74
SOX2P48431 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX2P48431 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX2P48431 CFL1P1-202ENST00000432948 411 ntBASIC4.21□□□□□ -1.74
SOX2P48431 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX2P48431 AC105402.2-201ENST00000438503 358 ntBASIC4.21□□□□□ -1.74
SOX2P48431 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX2P48431 KNOP1P3-201ENST00000446933 426 ntBASIC4.21□□□□□ -1.74
SOX2P48431 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX2P48431 PAXBP1P1-201ENST00000449315 447 ntBASIC4.21□□□□□ -1.74
SOX2P48431 PDSS1P2-201ENST00000449397 678 ntBASIC4.21□□□□□ -1.74
SOX2P48431 RPL7P31-201ENST00000450192 724 ntBASIC4.21□□□□□ -1.74
SOX2P48431 RPL7P22-201ENST00000466005 733 ntBASIC4.21□□□□□ -1.74
SOX2P48431 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
SOX2P48431 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.21□□□□□ -1.74
SOX2P48431 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX2P48431 RN7SL558P-201ENST00000497468 299 ntBASIC4.21□□□□□ -1.74
SOX2P48431 TMEM251P1-201ENST00000503717 318 ntBASIC4.21□□□□□ -1.74
SOX2P48431 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX2P48431 AC010460.1-201ENST00000507087 466 ntBASIC4.21□□□□□ -1.74
SOX2P48431 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX2P48431 COX6B1P5-201ENST00000509843 249 ntBASIC4.21□□□□□ -1.74
SOX2P48431 AC109464.2-201ENST00000510242 943 ntBASIC4.21□□□□□ -1.74
SOX2P48431 FABP5P5-201ENST00000515537 406 ntBASIC4.21□□□□□ -1.74
SOX2P48431 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
SOX2P48431 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.21□□□□□ -1.74
SOX2P48431 AC013828.2-201ENST00000532487 235 ntBASIC4.21□□□□□ -1.74
SOX2P48431 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.21□□□□□ -1.74
SOX2P48431 PDCD5P1-201ENST00000543528 309 ntBASIC4.21□□□□□ -1.74
SOX2P48431 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX2P48431 OR11J2P-201ENST00000555298 907 ntBASIC4.21□□□□□ -1.74
SOX2P48431 MTATP6P3-201ENST00000581686 676 ntBASIC4.21□□□□□ -1.74
SOX2P48431 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.21□□□□□ -1.74
SOX2P48431 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX2P48431 SEPT7P9-203ENST00000604116 343 ntBASIC4.21□□□□□ -1.74
SOX2P48431 COX6CP4-201ENST00000605798 228 ntBASIC4.21□□□□□ -1.74
SOX2P48431 AC097468.3-201ENST00000607956 456 ntBASIC4.21□□□□□ -1.74
SOX2P48431 AL159169.3-201ENST00000608871 561 ntBASIC4.21□□□□□ -1.74
SOX2P48431 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX2P48431 MTND5P28-201ENST00000438005 1594 ntBASIC4.21□□□□□ -1.74
SOX2P48431 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX2P48431 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX2P48431 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX2P48431 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.21□□□□□ -1.74
SOX2P48431 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SOX2P48431 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SOX2P48431 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX2P48431 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.2□□□□□ -1.74
SOX2P48431 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SOX2P48431 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX2P48431 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.2□□□□□ -1.74
SOX2P48431 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
SOX2P48431 DHX9P1-201ENST00000436565 3076 ntBASIC4.2□□□□□ -1.74
SOX2P48431 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms