Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC8P31273 SOD1P3-201ENST00000518682 454 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 AC007991.1-201ENST00000522680 631 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 DEFB109D-201ENST00000529497 240 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.37□□□□□ -1.71
HOXC8P31273 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC8P31273 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.37□□□□□ -1.71
HOXC8P31273 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.37□□□□□ -1.71
HOXC8P31273 BPTFP1-201ENST00000579209 492 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 RPP40P2-201ENST00000603596 712 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 AP002802.2-201ENST00000605877 235 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 AC009974.1-201ENST00000608881 455 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.37□□□□□ -1.71
HOXC8P31273 AC073530.2-201ENST00000623987 261 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 FAM157B-203ENST00000639350 358 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC8P31273 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC8P31273 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HOXC8P31273 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.37□□□□□ -1.71
HOXC8P31273 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 AL136964.1-201ENST00000622038 2990 ntBASIC4.37□□□□□ -1.71
HOXC8P31273 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC8P31273 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
HOXC8P31273 RNU6-549P-201ENST00000384433 107 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 MIR124-3-201ENST00000384866 87 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 ZNF602P-201ENST00000405929 924 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC8P31273 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC8P31273 ARF4P4-201ENST00000439608 520 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 MTCO1P53-201ENST00000441633 699 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 SEPT14P24-201ENST00000447236 180 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC8P31273 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC8P31273 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC8P31273 snoU13.7-201ENST00000459220 104 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.36□□□□□ -1.71
HOXC8P31273 RNU1-95P-201ENST00000516357 160 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 RNU1-128P-201ENST00000516704 160 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC8P31273 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC8P31273 EEF1A1P37-201ENST00000522748 715 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC8P31273 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC8P31273 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.36□□□□□ -1.71
HOXC8P31273 CENPUP2-201ENST00000555897 1186 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.36□□□□□ -1.71
HOXC8P31273 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC8P31273 MTCYBP23-201ENST00000558717 1102 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 MTND3P12-201ENST00000559068 328 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.36□□□□□ -1.71
HOXC8P31273 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.36□□□□□ -1.71
HOXC8P31273 AP003117.2-201ENST00000606010 545 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 VN1R74P-201ENST00000613259 503 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 AC009237.17-201ENST00000618111 748 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 AC022079.2-201ENST00000619739 566 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 AC004777.1-201ENST00000624317 287 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 MIR4496-201ENST00000635896 61 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 AF001550.2-201ENST00000636643 217 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 AC068620.4-201ENST00000636730 1182 ntBASIC4.36□□□□□ -1.71
HOXC8P31273 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC8P31273 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC8P31273 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC8P31273 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
HOXC8P31273 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC8P31273 ZNF285B-201ENST00000561698 1767 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC8P31273 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC8P31273 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC8P31273 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC8P31273 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC8P31273 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXC8P31273 RNU6-1293P-201ENST00000384077 107 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 DSTNP4-201ENST00000399472 474 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AL603865.2-201ENST00000401679 213 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 SNORA3.3-201ENST00000408712 125 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AC093578.1-201ENST00000415219 368 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC8P31273 RPL31P45-201ENST00000419532 356 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 RPS12P23-201ENST00000419579 400 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AC092447.3-201ENST00000426027 686 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 OR4F13P-201ENST00000428478 931 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXC8P31273 PSMA2P3-201ENST00000429685 675 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AL513175.1-201ENST00000431492 780 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC8P31273 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC8P31273 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC8P31273 AL050341.1-201ENST00000447743 313 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXC8P31273 AL121877.1-201ENST00000453704 622 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AL133162.1-201ENST00000463228 453 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 S100A11P1-201ENST00000477525 312 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 RPL21P103-201ENST00000479921 488 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 ARL4AP1-201ENST00000503220 705 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXC8P31273 AC020699.1-201ENST00000505161 445 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 TCP11X3P-202ENST00000514289 1254 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AP001207.2-201ENST00000519490 539 ntBASIC4.35□□□□□ -1.71
HOXC8P31273 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms