Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AC021660.1-201ENST00000465006 554 ntBASIC5.5□□□□□ -1.53
CNGA1P29973 AC091153.1-201ENST00000466297 402 ntBASIC5.5□□□□□ -1.53
CNGA1P29973 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.5□□□□□ -1.53
CNGA1P29973 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CNGA1P29973 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.5□□□□□ -1.53
CNGA1P29973 AL024509.2-201ENST00000493462 493 ntBASIC5.5□□□□□ -1.53
CNGA1P29973 ARL4AP1-201ENST00000503220 705 ntBASIC5.5□□□□□ -1.53
CNGA1P29973 MTND5P13-201ENST00000513046 1079 ntBASIC5.5□□□□□ -1.53
CNGA1P29973 HIGD1AP10-201ENST00000527837 282 ntBASIC5.5□□□□□ -1.53
CNGA1P29973 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.5□□□□□ -1.53
CNGA1P29973 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.5□□□□□ -1.53
CNGA1P29973 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.5□□□□□ -1.53
CNGA1P29973 AC103792.1-201ENST00000603591 919 ntBASIC5.5□□□□□ -1.53
CNGA1P29973 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.5□□□□□ -1.53
CNGA1P29973 AC011939.3-201ENST00000613686 466 ntBASIC5.5□□□□□ -1.53
CNGA1P29973 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.5□□□□□ -1.53
CNGA1P29973 AC092192.1-201ENST00000633154 1018 ntBASIC5.5□□□□□ -1.53
CNGA1P29973 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
CNGA1P29973 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.5□□□□□ -1.53
CNGA1P29973 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNGA1P29973 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CNGA1P29973 AP002907.1-201ENST00000606361 1430 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNGA1P29973 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNGA1P29973 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CNGA1P29973 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNGA1P29973 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.49□□□□□ -1.53
CNGA1P29973 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.49□□□□□ -1.53
CNGA1P29973 UBBP2-201ENST00000376781 231 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 MIR129-1-201ENST00000384972 72 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AC016769.3-201ENST00000396562 315 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 BTBD10P2-201ENST00000404779 676 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 RPL7P8-201ENST00000411964 730 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.49□□□□□ -1.53
CNGA1P29973 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.49□□□□□ -1.53
CNGA1P29973 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.49□□□□□ -1.53
CNGA1P29973 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.49□□□□□ -1.53
CNGA1P29973 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.49□□□□□ -1.53
CNGA1P29973 NUTF2P7-201ENST00000453086 375 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 TPTE2P5-203ENST00000458118 728 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 RPL7P22-201ENST00000466005 733 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AL136126.1-201ENST00000473603 402 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 RAP1BP2-201ENST00000478270 544 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AC108941.1-201ENST00000502853 530 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 TMEM251P1-201ENST00000503717 318 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC5.49□□□□□ -1.53
CNGA1P29973 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.49□□□□□ -1.53
CNGA1P29973 RNU6-150P-201ENST00000516237 95 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 RNA5SP392-201ENST00000516905 112 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 OR4A45P-201ENST00000529954 901 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC5.49□□□□□ -1.53
CNGA1P29973 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.49□□□□□ -1.53
CNGA1P29973 PSMB7P1-201ENST00000556349 514 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 ROCK1P1-201ENST00000573767 549 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AC023575.1-201ENST00000580510 358 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AC022726.1-201ENST00000587475 207 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AC092354.1-201ENST00000606057 376 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AL158063.1-201ENST00000615349 536 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AL049794.2-201ENST00000616301 365 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 AC006927.3-201ENST00000638789 384 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 FTO-223ENST00000640179 210 ntTSL 5 BASIC5.49□□□□□ -1.53
CNGA1P29973 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CNGA1P29973 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNGA1P29973 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.49□□□□□ -1.53
CNGA1P29973 MAPK10-304ENST00000641341 3984 ntBASIC5.49□□□□□ -1.53
CNGA1P29973 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNGA1P29973 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNGA1P29973 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CNGA1P29973 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CNGA1P29973 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNGA1P29973 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNGA1P29973 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CNGA1P29973 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CNGA1P29973 Y_RNA.51-201ENST00000362725 102 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5.48□□□□□ -1.53
CNGA1P29973 RNU6-723P-201ENST00000383973 107 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CNGA1P29973 AL357515.1-201ENST00000402967 542 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.48□□□□□ -1.53
CNGA1P29973 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.48□□□□□ -1.53
CNGA1P29973 AL049610.1-201ENST00000423374 372 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 MTCO2P16-201ENST00000436962 677 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 THAP5P1-201ENST00000439089 262 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC5.48□□□□□ -1.53
CNGA1P29973 MTND1P30-201ENST00000441241 901 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 TAF9P1-201ENST00000445421 515 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 ZNF114P1-201ENST00000453500 292 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 TAF9P2-201ENST00000454958 515 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.48□□□□□ -1.53
CNGA1P29973 RN7SKP21-201ENST00000516503 220 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CNGA1P29973 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.48□□□□□ -1.53
CNGA1P29973 AC092851.1-201ENST00000535964 478 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 AC006349.1-201ENST00000555526 235 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.48□□□□□ -1.53
CNGA1P29973 BNIP3P5-201ENST00000562290 498 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC5.48□□□□□ -1.53
CNGA1P29973 AC008507.1-201ENST00000587506 734 ntBASIC5.48□□□□□ -1.53
CNGA1P29973 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.48□□□□□ -1.53
CNGA1P29973 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms