Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC096638.2-201ENST00000434965 711 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC083863.1-201ENST00000438811 231 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 EXTL2P1-201ENST00000446218 416 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC106872.2-201ENST00000494303 480 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 RPL23AP55-201ENST00000498163 452 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC118282.2-201ENST00000508739 374 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC109471.1-201ENST00000511631 612 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 SNORA70.14-201ENST00000516205 110 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 RN7SKP21-201ENST00000516503 220 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AGGF1P6-201ENST00000569213 976 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC084824.5-201ENST00000612009 413 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AL354976.1-201ENST00000613843 387 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AL139089.1-201ENST00000620372 975 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC093875.1-201ENST00000623688 504 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC112484.5-201ENST00000624189 228 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 AC112200.1-201ENST00000625015 234 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 BX649567.1-201ENST00000642071 1134 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 MAPK10-373ENST00000641983 6772 ntBASIC4.02□□□□□ -1.77
HLA-DPA1P20036 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.02□□□□□ -1.77
HLA-DPA1P20036 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AL592494.2-201ENST00000425455 1548 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 RNA5SP399-201ENST00000364003 117 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 RNVU1-3-201ENST00000364313 161 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 SNORA51.2-201ENST00000364595 132 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 RNU6-468P-201ENST00000384003 109 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 RNU6-549P-201ENST00000384433 107 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 RNU6-837P-201ENST00000391056 108 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 RNU4-78P-201ENST00000410940 126 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AC019070.1-201ENST00000415008 1024 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 TOMM22P1-201ENST00000418578 312 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AC092647.1-201ENST00000420654 287 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 NANOGP6-201ENST00000429190 847 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 OR4C10P-201ENST00000434991 931 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AL592437.1-201ENST00000443781 492 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 RPS11P1-201ENST00000451072 473 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 ANP32BP2-201ENST00000454525 545 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AC068305.1-201ENST00000497406 726 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AC139783.2-201ENST00000504847 1145 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 MTCO3P44-201ENST00000510977 541 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 RN7SKP244-201ENST00000516513 307 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AP004371.1-201ENST00000525240 214 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 OR4R2P-201ENST00000530815 597 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 OR4C2P-201ENST00000530855 1064 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AP003385.6-201ENST00000531603 374 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 MIR3160-1-201ENST00000577972 85 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AC002487.1-201ENST00000604565 994 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AL354760.1-201ENST00000608357 643 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 MIR6867-201ENST00000610636 67 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AL591424.2-201ENST00000617023 128 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 AF127577.6-201ENST00000623352 2191 ntBASIC4.01□□□□□ -1.77
HLA-DPA1P20036 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HLA-DPA1P20036 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HLA-DPA1P20036 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HLA-DPA1P20036 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPA1P20036 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPA1P20036 IPO8P1-201ENST00000455509 3109 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4□□□□□ -1.77
HLA-DPA1P20036 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HLA-DPA1P20036 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DPA1P20036 RNA5SP479-201ENST00000364858 117 ntBASIC4□□□□□ -1.77
HLA-DPA1P20036 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms