Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.24□□□□□ -1.41
ERCC3P19447 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 AL592295.2-201ENST00000612578 206 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 AC090527.3-201ENST00000619041 548 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
ERCC3P19447 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC090971.4-201ENST00000560291 1800 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 MAPK10-328ENST00000641553 4009 ntBASIC6.24□□□□□ -1.41
ERCC3P19447 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.24□□□□□ -1.41
ERCC3P19447 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.24□□□□□ -1.41
ERCC3P19447 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
ERCC3P19447 AC114774.1-201ENST00000507410 1770 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC3P19447 ASNSP1-201ENST00000518311 1939 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 AC024560.2-201ENST00000507981 1497 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC3P19447 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
ERCC3P19447 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ERCC3P19447 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC3P19447 Y_RNA.234-201ENST00000364409 97 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 MTND4LP20-201ENST00000402379 270 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 RPL7P25-201ENST00000404151 721 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 AL590002.1-201ENST00000406554 418 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 CCNG1P1-201ENST00000406783 885 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 RNU2-8P-201ENST00000410727 190 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 RPL37P18-201ENST00000411602 243 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.23□□□□□ -1.41
ERCC3P19447 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC3P19447 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC3P19447 RPL31P35-201ENST00000431058 377 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 MTND3P21-201ENST00000433774 331 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 AL772161.1-201ENST00000439130 476 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC3P19447 USP9YP15-201ENST00000442391 422 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC3P19447 RGS5-217ENST00000451759 835 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC3P19447 HMGB3P21-201ENST00000452483 547 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC3P19447 AL672167.3-201ENST00000465951 960 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC6.23□□□□□ -1.41
ERCC3P19447 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 AC091133.4-201ENST00000511142 308 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.23□□□□□ -1.41
ERCC3P19447 RNU6-513P-201ENST00000516104 104 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 MAL2-208ENST00000523307 556 ntTSL 4 BASIC6.23□□□□□ -1.41
ERCC3P19447 AP000676.2-201ENST00000529711 301 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC3P19447 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC6.23□□□□□ -1.41
ERCC3P19447 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC6.23□□□□□ -1.41
ERCC3P19447 AC099489.2-201ENST00000574976 260 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 MIR4660-201ENST00000583549 74 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 MIR98-201ENST00000606724 119 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
ERCC3P19447 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC3P19447 ZNF734P-201ENST00000419494 1534 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC3P19447 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
ERCC3P19447 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.23□□□□□ -1.41
ERCC3P19447 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
ERCC3P19447 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.23□□□□□ -1.41
ERCC3P19447 AC091046.3-201ENST00000631455 1574 ntBASIC6.23□□□□□ -1.41
ERCC3P19447 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC3P19447 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
ERCC3P19447 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.22□□□□□ -1.41
ERCC3P19447 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC3P19447 AL360270.2-201ENST00000562952 5985 ntBASIC6.22□□□□□ -1.41
ERCC3P19447 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC3P19447 AC114947.2-201ENST00000565748 2125 ntBASIC6.22□□□□□ -1.41
ERCC3P19447 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC3P19447 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC3P19447 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
ERCC3P19447 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC3P19447 RNU1-136P-201ENST00000384181 164 ntBASIC6.22□□□□□ -1.41
ERCC3P19447 RPL11P3-201ENST00000395256 523 ntBASIC6.22□□□□□ -1.41
ERCC3P19447 RN7SKP235-201ENST00000410662 305 ntBASIC6.22□□□□□ -1.41
ERCC3P19447 RN7SKP247-201ENST00000411094 308 ntBASIC6.22□□□□□ -1.41
ERCC3P19447 AC093162.1-201ENST00000419682 124 ntBASIC6.22□□□□□ -1.41
ERCC3P19447 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.22□□□□□ -1.41
ERCC3P19447 DPPA2P1-201ENST00000428060 556 ntBASIC6.22□□□□□ -1.41
ERCC3P19447 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC6.22□□□□□ -1.41
ERCC3P19447 RPL12P17-201ENST00000432393 498 ntBASIC6.22□□□□□ -1.41
ERCC3P19447 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC6.22□□□□□ -1.41
ERCC3P19447 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.22□□□□□ -1.41
ERCC3P19447 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC3P19447 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.22□□□□□ -1.41
ERCC3P19447 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC6.22□□□□□ -1.41
ERCC3P19447 AC092989.1-201ENST00000481235 277 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms