Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
COL11A1P12107 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
COL11A1P12107 RIOK3P1-201ENST00000418778 1528 ntBASIC3.48□□□□□ -1.85
COL11A1P12107 SPATA2P1-201ENST00000431223 2055 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
COL11A1P12107 RPL7P25-201ENST00000404151 721 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.47□□□□□ -1.85
COL11A1P12107 DUTP6-201ENST00000425573 462 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 SETP5-201ENST00000437270 562 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 HMGB3P11-201ENST00000440127 604 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 AC093156.1-201ENST00000440382 670 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 AC016696.1-201ENST00000446949 318 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 S100A11P1-201ENST00000477525 312 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 AC091544.1-201ENST00000484702 348 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
COL11A1P12107 RNA5SP356-201ENST00000515972 94 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.47□□□□□ -1.85
COL11A1P12107 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.47□□□□□ -1.85
COL11A1P12107 AC008126.1-201ENST00000549019 480 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.47□□□□□ -1.85
COL11A1P12107 HMGB1P6-201ENST00000569046 646 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.47□□□□□ -1.85
COL11A1P12107 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.47□□□□□ -1.85
COL11A1P12107 AC024153.1-201ENST00000603103 365 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 AC132825.8-201ENST00000640783 297 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A1P12107 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A1P12107 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
COL11A1P12107 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
COL11A1P12107 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.47□□□□□ -1.85
COL11A1P12107 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.47□□□□□ -1.85
COL11A1P12107 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
COL11A1P12107 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A1P12107 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A1P12107 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A1P12107 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A1P12107 SNORA68.2-201ENST00000391263 128 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 RPA3-203ENST00000401447 414 ntTSL 3 BASIC3.47□□□□□ -1.85
COL11A1P12107 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A1P12107 AC112653.1-201ENST00000443851 386 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 HMGB1P5-202ENST00000451497 985 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
COL11A1P12107 FABP5P12-201ENST00000515543 389 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.47□□□□□ -1.85
COL11A1P12107 AC015813.6-201ENST00000624409 5808 ntBASIC3.47□□□□□ -1.85
COL11A1P12107 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL11A1P12107 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
COL11A1P12107 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
COL11A1P12107 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.46□□□□□ -1.86
COL11A1P12107 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.46□□□□□ -1.86
COL11A1P12107 MIR2276-201ENST00000516886 89 ntBASIC3.46□□□□□ -1.86
COL11A1P12107 AP001636.2-201ENST00000525517 696 ntBASIC3.46□□□□□ -1.86
COL11A1P12107 AC135001.1-201ENST00000544546 283 ntBASIC3.46□□□□□ -1.86
COL11A1P12107 AC007619.2-201ENST00000605743 379 ntBASIC3.46□□□□□ -1.86
COL11A1P12107 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.46□□□□□ -1.86
COL11A1P12107 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
COL11A1P12107 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.46□□□□□ -1.86
COL11A1P12107 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL11A1P12107 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.45□□□□□ -1.86
COL11A1P12107 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.45□□□□□ -1.86
COL11A1P12107 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.45□□□□□ -1.86
COL11A1P12107 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL11A1P12107 AC087190.4-201ENST00000574616 8334 ntBASIC3.45□□□□□ -1.86
COL11A1P12107 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
COL11A1P12107 MIR423-201ENST00000362201 94 ntBASIC3.45□□□□□ -1.86
COL11A1P12107 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.45□□□□□ -1.86
COL11A1P12107 SNORA48.8-201ENST00000391324 134 ntBASIC3.45□□□□□ -1.86
COL11A1P12107 AC127526.1-201ENST00000417526 366 ntBASIC3.45□□□□□ -1.86
COL11A1P12107 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.45□□□□□ -1.86
COL11A1P12107 AC108734.1-201ENST00000439549 399 ntBASIC3.45□□□□□ -1.86
COL11A1P12107 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.45□□□□□ -1.86
COL11A1P12107 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.45□□□□□ -1.86
COL11A1P12107 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
COL11A1P12107 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
COL11A1P12107 AC012020.1-201ENST00000624541 1728 ntBASIC3.45□□□□□ -1.86
COL11A1P12107 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
COL11A1P12107 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
COL11A1P12107 THAP12P8-201ENST00000447914 2115 ntBASIC3.45□□□□□ -1.86
COL11A1P12107 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL11A1P12107 SNORA9.2-201ENST00000365361 133 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL11A1P12107 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.44□□□□□ -1.86
COL11A1P12107 HMGN1P18-201ENST00000457642 277 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 COX6CP8-201ENST00000522620 226 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 AL139174.1-201ENST00000531489 886 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 MIR4319-201ENST00000577285 85 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.44□□□□□ -1.86
COL11A1P12107 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.44□□□□□ -1.86
COL11A1P12107 MIR6715A-201ENST00000615929 79 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC3.44□□□□□ -1.86
COL11A1P12107 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.44□□□□□ -1.86
COL11A1P12107 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.44□□□□□ -1.86
COL11A1P12107 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL11A1P12107 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
COL11A1P12107 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
COL11A1P12107 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
COL11A1P12107 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.44□□□□□ -1.86
COL11A1P12107 CDC27P2-201ENST00000425026 1922 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 RPL23AP48-201ENST00000406913 488 ntBASIC3.44□□□□□ -1.86
COL11A1P12107 AMD1P2-201ENST00000412936 992 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms