Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RFPL4AP6-201ENST00000616792 846 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDGFAP04085 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFAP04085 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PDGFAP04085 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFAP04085 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFAP04085 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.82□□□□□ -1.48
PDGFAP04085 AC007842.1-201ENST00000597336 2039 ntBASIC5.82□□□□□ -1.48
PDGFAP04085 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 NUP210L-201ENST00000271854 5424 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
PDGFAP04085 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.82□□□□□ -1.48
PDGFAP04085 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PDGFAP04085 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFAP04085 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFAP04085 AC025470.1-201ENST00000510053 2032 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFAP04085 MTCO1P12-201ENST00000414273 1543 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
PDGFAP04085 RN7SKP44-201ENST00000363602 316 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AL359643.1-201ENST00000404109 423 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 RPL36AP6-201ENST00000435770 321 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFAP04085 AL161636.2-201ENST00000445179 927 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 RPL23AP43-201ENST00000446445 471 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 AL118520.1-201ENST00000450770 291 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 RNU6-1208P-201ENST00000459588 107 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 RPL39P5-202ENST00000512505 151 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AC016065.2-201ENST00000514530 444 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 Y_RNA.682-201ENST00000516457 100 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 RNA5SP438-201ENST00000516561 112 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AC027308.1-201ENST00000517993 110 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.81□□□□□ -1.48
PDGFAP04085 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFAP04085 AP001804.3-201ENST00000525146 880 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 AC063949.1-201ENST00000552900 865 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 AC007956.1-201ENST00000555623 542 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 AC008737.2-201ENST00000599446 118 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.81□□□□□ -1.48
PDGFAP04085 AC007566.2-201ENST00000603642 413 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 CYP2C61P-201ENST00000604072 290 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AC016925.2-201ENST00000605108 242 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AC133644.2-201ENST00000608142 540 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AC092807.2-201ENST00000609367 243 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AC007546.1-201ENST00000619452 559 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.81□□□□□ -1.48
PDGFAP04085 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFAP04085 AC008627.1-201ENST00000517511 1704 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
PDGFAP04085 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.81□□□□□ -1.48
PDGFAP04085 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.81□□□□□ -1.48
PDGFAP04085 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
PDGFAP04085 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 AL355834.1-201ENST00000556602 3965 ntBASIC5.81□□□□□ -1.48
PDGFAP04085 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDGFAP04085 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFAP04085 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDGFAP04085 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDGFAP04085 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFAP04085 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDGFAP04085 RNA5SP242-201ENST00000364171 118 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 RNU6-1078P-201ENST00000364522 103 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDGFAP04085 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.8□□□□□ -1.48
PDGFAP04085 RPL7L1P10-201ENST00000427790 463 ntBASIC5.8□□□□□ -1.48
PDGFAP04085 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.8□□□□□ -1.48
PDGFAP04085 RPS3AP52-201ENST00000435639 297 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms