Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF3O43395 AC234771.5-201ENST00000600161 514 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 AL109653.1-201ENST00000603091 248 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 AL596327.1-201ENST00000603629 213 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 Z99497.2-201ENST00000603634 310 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 AC121247.2-201ENST00000604776 136 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 AC114878.2-201ENST00000604863 1251 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 AC010201.1-201ENST00000605051 540 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 MIR6820-201ENST00000611508 62 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 AC004223.4-201ENST00000612426 332 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 AL139418.1-201ENST00000613613 177 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF3O43395 AP005019.3-201ENST00000620418 560 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 AP000676.3-201ENST00000623299 569 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF3O43395 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PRPF3O43395 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF3O43395 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF3O43395 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF3O43395 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF3O43395 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF3O43395 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF3O43395 IQCB2P-201ENST00000401788 1633 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF3O43395 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF3O43395 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.18□□□□□ -1.58
PRPF3O43395 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.18□□□□□ -1.58
PRPF3O43395 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PRPF3O43395 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.18□□□□□ -1.58
PRPF3O43395 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PRPF3O43395 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
PRPF3O43395 AL445523.1-201ENST00000451184 1362 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF3O43395 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
PRPF3O43395 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.17□□□□□ -1.58
PRPF3O43395 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF3O43395 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF3O43395 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF3O43395 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF3O43395 RPL23AP39-201ENST00000415533 405 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 P2RY10P2-201ENST00000416730 913 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AL953862.1-201ENST00000423016 168 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AL593851.1-201ENST00000426171 157 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.17□□□□□ -1.58
PRPF3O43395 PSMA2P3-201ENST00000429685 675 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 RPL23AP25-201ENST00000430973 463 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.17□□□□□ -1.58
PRPF3O43395 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF3O43395 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.17□□□□□ -1.58
PRPF3O43395 AC097493.1-201ENST00000463958 372 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AC146507.1-201ENST00000468335 354 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC5.17□□□□□ -1.58
PRPF3O43395 XKRY-201ENST00000510392 1100 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 RN7SKP277-201ENST00000516895 283 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 RN7SKP234-201ENST00000517173 224 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AC090151.1-201ENST00000520784 730 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.17□□□□□ -1.58
PRPF3O43395 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PRPF3O43395 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF3O43395 AC020634.1-201ENST00000608701 549 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AL354976.1-201ENST00000613843 387 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AL392048.1-201ENST00000613946 534 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PRPF3O43395 AP000346.3-201ENST00000622821 210 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AC006065.6-201ENST00000625201 545 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 AC127502.3-201ENST00000636170 1206 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 PABPC1P7-201ENST00000413177 1513 ntBASIC5.17□□□□□ -1.58
PRPF3O43395 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
PRPF3O43395 AP000526.1-201ENST00000603308 1388 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF3O43395 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF3O43395 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF3O43395 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF3O43395 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF3O43395 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF3O43395 RNU6-462P-201ENST00000362659 105 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 RNU1-20P-201ENST00000363314 162 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
PRPF3O43395 RNU6-657P-201ENST00000383904 107 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 ATP5F1P4-201ENST00000397288 746 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 SNRPEP2-201ENST00000397592 279 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF3O43395 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PRPF3O43395 RN7SKP167-201ENST00000411047 285 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF3O43395 DNAJA1P2-201ENST00000421360 1197 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC5.16□□□□□ -1.58
PRPF3O43395 MTCYBP39-201ENST00000437562 491 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 KATNBL1P3-201ENST00000443475 909 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.16□□□□□ -1.58
PRPF3O43395 AC104073.1-201ENST00000451988 151 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 TRGVB-201ENST00000453257 471 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 AC026410.2-201ENST00000460281 156 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 AC010468.1-201ENST00000461022 817 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 RPS15AP17-201ENST00000470598 390 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 RPL21P103-201ENST00000479921 488 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 AC090013.1-201ENST00000485147 480 ntBASIC5.16□□□□□ -1.58
PRPF3O43395 OR4G11P-201ENST00000492842 939 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms