Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 Z99129.1-201ENST00000612510 255 ntBASIC5.52□□□□□ -1.53
PTPDC1A2A3K4 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
PTPDC1A2A3K4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PTPDC1A2A3K4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.52□□□□□ -1.53
PTPDC1A2A3K4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPDC1A2A3K4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.52□□□□□ -1.53
PTPDC1A2A3K4 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PTPDC1A2A3K4 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PTPDC1A2A3K4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.52□□□□□ -1.53
PTPDC1A2A3K4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 MTCO1P14-201ENST00000441695 1559 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC010329.2-201ENST00000595195 2737 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 CYP1D1P-201ENST00000416662 1433 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 RNU6-462P-201ENST00000362659 105 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 RNU6-723P-201ENST00000383973 107 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 MIR92A2-201ENST00000385299 75 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 RNA5SP332-201ENST00000391063 115 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 RPL21P108-201ENST00000413857 481 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 RAD23BP2-201ENST00000416003 1207 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 OFD1P13Y-201ENST00000431179 1232 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC016831.4-201ENST00000438302 307 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AL357520.1-201ENST00000441557 453 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC104651.2-201ENST00000447549 528 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 RN7SL481P-201ENST00000477764 299 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 RNU6-513P-201ENST00000516104 104 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 RN7SKP96-201ENST00000516948 297 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 OR5M2P-201ENST00000529003 936 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 CYCSP2-201ENST00000558168 301 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC012065.4-201ENST00000602445 679 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC107214.2-201ENST00000608204 634 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AP001521.1-201ENST00000609150 300 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC092794.1-201ENST00000612734 582 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AL356596.1-201ENST00000624230 379 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC231657.1-201ENST00000624313 397 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AL442639.1-201ENST00000625030 1899 ntBASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.51□□□□□ -1.53
PTPDC1A2A3K4 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 AP000542.2-201ENST00000623199 6179 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 SNRPEP3-201ENST00000338402 276 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 RNU5F-7P-201ENST00000363696 115 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 RNU6-444P-201ENST00000383988 108 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 PRRC2CP1-201ENST00000404428 159 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 RNU2-28P-201ENST00000410457 189 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 PRELID3BP11-201ENST00000414230 479 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 ATG4AP1-201ENST00000416893 538 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 AC008280.1-201ENST00000418851 412 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 AC068287.1-201ENST00000430283 295 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 OR4G11P-201ENST00000492842 939 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 AC111000.3-201ENST00000508057 576 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 KRT19P6-201ENST00000510983 209 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 RN7SKP46-201ENST00000515942 234 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 RNU1-6P-201ENST00000516290 144 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 DUXAP2-201ENST00000519198 589 ntBASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.5□□□□□ -1.53
PTPDC1A2A3K4 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 120.7 ms