Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC068870.3-201ENST00000625077 2536 ntBASIC6.52□□□□□ -1.37
LOC102724428A0A0B4J2F2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.52□□□□□ -1.37
LOC102724428A0A0B4J2F2 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.52□□□□□ -1.37
LOC102724428A0A0B4J2F2 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LOC102724428A0A0B4J2F2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
LOC102724428A0A0B4J2F2 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.37
LOC102724428A0A0B4J2F2 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC046144.1-201ENST00000478559 1853 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC092681.1-201ENST00000297369 291 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 SNORA70.2-201ENST00000364506 135 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AL136133.1-201ENST00000413694 376 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 VN1R36P-201ENST00000414936 291 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 GTF2IP20-201ENST00000431663 360 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 ACTR3P2-201ENST00000439585 1257 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC092809.1-201ENST00000441469 474 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 Z82190.1-201ENST00000454534 490 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 snoU13.1-201ENST00000459157 104 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC021660.1-201ENST00000465006 554 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 MTND1P3-201ENST00000484956 952 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC112204.1-201ENST00000502591 103 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 IGBP1P4-201ENST00000503202 879 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AP000790.1-201ENST00000528891 737 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 ATP5J2P6-201ENST00000565203 266 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC136624.4-201ENST00000573044 370 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC018638.8-201ENST00000588755 281 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC022916.3-201ENST00000592961 742 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC023509.5-201ENST00000617434 807 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AP000547.3-204ENST00000588548 2523 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC006378.2-201ENST00000623178 2476 ntBASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC010928.1-201ENST00000592477 1447 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC018628.1-201ENST00000624147 3819 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC099654.2-201ENST00000433031 1980 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 SNX18P3-202ENST00000565670 1750 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 Y_RNA.138-201ENST00000363462 102 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 RNY3P3-201ENST00000363816 102 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 RN7SKP153-201ENST00000365026 316 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AL390316.1-201ENST00000406279 553 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AL359704.1-201ENST00000411586 781 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 NANOGP6-201ENST00000429190 847 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 RPL7P4-203ENST00000430239 730 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 TXNP5-201ENST00000441043 315 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 RN7SL443P-201ENST00000464331 290 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC103987.1-201ENST00000473394 348 ntBASIC6.5□□□□□ -1.37
LOC102724428A0A0B4J2F2 AC022133.1-201ENST00000490961 571 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms