Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PTMAP3-201ENST00000447474 330 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 MTND5P20-201ENST00000448677 143 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 MTND2P24-201ENST00000453434 806 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 OR6K1P-201ENST00000456766 971 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 RNU7-136P-201ENST00000458819 69 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 FAM172BP-201ENST00000487497 1089 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 HMGB1P36-201ENST00000487709 576 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 RN7SL629P-201ENST00000489622 285 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC072052.1-201ENST00000496556 306 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC093824.1-201ENST00000508796 343 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 RNU6-347P-201ENST00000516658 105 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 HSPA8P13-201ENST00000523715 472 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 ADI1P3-201ENST00000549509 470 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 RN7SL708P-201ENST00000580952 299 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC011626.1-201ENST00000604710 562 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC092954.2-201ENST00000609103 430 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC135068.12-201ENST00000637370 931 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 LRRC77P-213ENST00000637727 880 ntBASIC5.4□□□□□ -1.54
PPARGC1AQ9UBK2 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PPARGC1AQ9UBK2 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
PPARGC1AQ9UBK2 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.4□□□□□ -1.55
PPARGC1AQ9UBK2 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.4□□□□□ -1.55
PPARGC1AQ9UBK2 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
PPARGC1AQ9UBK2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.55
PPARGC1AQ9UBK2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 THAP12P5-201ENST00000405864 2275 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 RNU1-43P-201ENST00000365052 165 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 RNU6-769P-201ENST00000384407 104 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 MTCO3P40-201ENST00000392516 676 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AL590002.1-201ENST00000406554 418 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 DUTP5-201ENST00000406790 469 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 MIR1182-201ENST00000408363 97 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 RPL12P9-201ENST00000412942 488 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 COX5BP7-201ENST00000414780 274 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC009961.2-201ENST00000435771 251 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 LSM1P1-201ENST00000438629 273 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AL389915.2-201ENST00000454576 441 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 RN7SL189P-201ENST00000468631 289 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 RN7SL177P-201ENST00000476596 299 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC023424.1-201ENST00000496058 459 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 HIGD1AP14-201ENST00000507617 282 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC117522.1-201ENST00000509821 380 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC024589.1-201ENST00000512207 263 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 ARL2BPP6-201ENST00000512757 439 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 SCARNA21.2-201ENST00000516600 166 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 Y_RNA.702-201ENST00000516843 96 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AP001893.2-201ENST00000526949 202 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AP001646.1-201ENST00000527936 915 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 OR5M2P-201ENST00000529003 936 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 RPL21P5-201ENST00000554662 472 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC018552.3-201ENST00000567416 561 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC080013.4-201ENST00000607624 649 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AL590282.1-201ENST00000610379 1136 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 AC104985.2-201ENST00000620598 500 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 PISRT1-201ENST00000626175 531 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 MIR6863-201ENST00000636112 90 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 SAMMSON-227ENST00000642114 1199 ntBASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PPARGC1AQ9UBK2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms