Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 AC104581.5-201ENST00000624171 7141 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 Y_RNA.145-201ENST00000363527 102 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 MIR301A-201ENST00000385261 86 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 RANP5-201ENST00000427731 655 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AL356867.1-201ENST00000429623 299 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 RPL7P28-201ENST00000437739 740 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AP000926.1-201ENST00000479573 241 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 RN7SL89P-201ENST00000480252 283 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 RN7SL869P-201ENST00000497032 300 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AC024558.1-201ENST00000505008 528 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AP000880.1-202ENST00000526487 588 ntTSL 3 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AC026371.1-201ENST00000551867 419 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 CYP4A26P-201ENST00000563017 196 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AC002545.1-201ENST00000592511 181 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 MIR6745-201ENST00000612694 127 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 CSTL1-205ENST00000619238 477 ntTSL 5 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 AC244517.12-201ENST00000623581 663 ntBASIC8.15□□□□□ -1.1
RTN4Q9NQC3 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.15□□□□□ -1.1
RTN4Q9NQC3 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.11
RTN4Q9NQC3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC8.15□□□□□ -1.11
RTN4Q9NQC3 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 OR4F13P-202ENST00000560066 2054 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 EEF1A1P26-201ENST00000458319 1363 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 RNA5SP71-201ENST00000362967 126 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 RNU4-44P-201ENST00000363050 141 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 LAP3P1-201ENST00000403648 294 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 RPS4XP7-201ENST00000406274 780 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 GSTA6P-201ENST00000424144 582 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 TXNP1-201ENST00000441872 371 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 SS18L2P1-201ENST00000445923 213 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AP000873.2-209ENST00000528083 547 ntTSL 4 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC087280.1-201ENST00000530632 1003 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 ULK4P1-202ENST00000565174 503 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC022968.1-201ENST00000567372 442 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 MIR548AC-201ENST00000585049 88 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 ANKRD20A19P-203ENST00000602724 295 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC016925.2-201ENST00000605108 242 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC004852.1-201ENST00000605206 154 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AL390877.1-201ENST00000605704 214 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC073389.2-201ENST00000606726 571 ntTSL 4 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 RN7SL3-201ENST00000610674 299 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 Metazoa_SRP.123-201ENST00000616695 286 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 SNORA43.5-201ENST00000631270 138 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 NOL8P1-201ENST00000508336 3529 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AL590065.1-201ENST00000603371 4774 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
RTN4Q9NQC3 AC005725.1-201ENST00000577346 2607 ntBASIC8.14□□□□□ -1.11
RTN4Q9NQC3 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 SNORA70.9-201ENST00000384370 135 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 ZSCAN12P1-201ENST00000406489 419 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 RNU4ATAC2P-201ENST00000408674 126 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 RN7SKP225-201ENST00000410405 352 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 RNU4-25P-201ENST00000410569 230 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 Z92846.1-201ENST00000456203 268 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 RN7SL635P-201ENST00000492123 296 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 PGAM1P13-201ENST00000507497 754 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC8.13□□□□□ -1.11
RTN4Q9NQC3 RNU6-1332P-201ENST00000516666 104 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 SNORA70.23-201ENST00000517218 151 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 IGHVII-44-2-201ENST00000517728 250 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 SNX18P27-201ENST00000523611 779 ntBASIC8.13□□□□□ -1.11
RTN4Q9NQC3 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC8.13□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms