Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 RNA5SP503-201ENST00000517047 117 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 MTCO2P4-201ENST00000517968 247 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 PTTG3P-201ENST00000521862 606 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AC090424.1-201ENST00000535243 736 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 EIF4A2P1-201ENST00000587313 1063 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AC015849.2-201ENST00000605738 409 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AC091946.2-201ENST00000606105 291 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AC016597.2-201ENST00000613256 341 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AC073530.2-201ENST00000623987 261 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 U6.115-201ENST00000636045 103 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 FLNB-214ENST00000493452 7402 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 AC012213.2-201ENST00000562917 4597 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 STX3-208ENST00000641815 3236 ntBASIC1.62□□□□□ -2.15
HMCN1Q96RW7 BCOR-202ENST00000378444 6358 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC1.62□□□□□ -2.15
HMCN1Q96RW7 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 SESTD1-203ENST00000428443 10615 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AL022323.4-201ENST00000623980 13120 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 EPHA1-AS1-202ENST00000429289 5018 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 RNU6-534P-201ENST00000364877 106 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 SNORD116.1-201ENST00000365628 92 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 RNU6-142P-201ENST00000384019 107 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 RPS26P8-201ENST00000393490 348 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC027644.1-201ENST00000419595 298 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 OR8F1P-201ENST00000425243 930 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 MTATP6P4-201ENST00000427725 675 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AL160175.1-201ENST00000428124 247 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC108734.1-201ENST00000439549 399 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 BTF3P6-201ENST00000448054 499 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 RPL23AP60-201ENST00000450011 454 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC021146.5-201ENST00000503544 545 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 RNU6-1299P-201ENST00000516316 100 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 UBE2NP1-201ENST00000545592 458 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC110743.1-201ENST00000584870 478 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC008536.2-201ENST00000607284 349 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 UQCRC2P1-201ENST00000417777 1332 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
HMCN1Q96RW7 RNU6-324P-201ENST00000363957 106 ntBASIC1.61□□□□□ -2.15
HMCN1Q96RW7 RNU6-340P-201ENST00000364005 107 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms