Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 NBEAP1-201ENST00000554452 979 ntBASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AC145350.1-201ENST00000567426 208 ntBASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AC008751.2-201ENST00000597885 980 ntBASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AP003973.1-201ENST00000604639 691 ntBASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AC105227.2-201ENST00000615075 605 ntBASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AC124312.6-202ENST00000623624 418 ntBASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AC079416.3-201ENST00000624479 549 ntBASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 MIR1322-201ENST00000638013 71 ntBASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.2□□□□□ -1.74
SLC44A1Q8WWI5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 Y_RNA.465-201ENST00000384293 102 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 CYP4F29P-201ENST00000420685 446 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 USP9YP31-201ENST00000431405 881 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 RPS6P15-201ENST00000431996 751 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 HMGB1P48-201ENST00000446155 598 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 EXTL2P1-201ENST00000446218 416 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 PNPLA4P1-201ENST00000458328 305 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 S100A11P1-201ENST00000477525 312 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC048346.1-201ENST00000510247 144 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC005351.1-201ENST00000511152 786 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC108043.1-201ENST00000512696 574 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC119751.5-201ENST00000514077 770 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 C1GALT1P3-201ENST00000522049 819 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 DEFB109D-201ENST00000529497 240 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 HNRNPCP4-201ENST00000571636 900 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 MIR4716-201ENST00000579628 84 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC097478.2-201ENST00000610572 514 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 TUSC7.1-201ENST00000610969 165 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC022509.4-201ENST00000621404 572 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AC015813.6-201ENST00000624409 5808 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 AL031985.3-201ENST00000565390 2449 ntBASIC4.19□□□□□ -1.74
SLC44A1Q8WWI5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC095050.2-201ENST00000510748 1458 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 EIF2AP4-201ENST00000424793 1781 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 FAM3C2-201ENST00000312214 681 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 FAM133CP-201ENST00000332869 704 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 RNU6-1214P-201ENST00000363650 109 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 RN7SKP235-201ENST00000410662 305 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 PGBD4P8-201ENST00000412993 562 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 MFSD13B-201ENST00000420133 1290 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 RPL7P44-201ENST00000424827 742 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AL138785.1-201ENST00000425821 331 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 RPL23AP1-201ENST00000428990 471 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 PPIAP17-201ENST00000438507 471 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 IFNWP4-201ENST00000453148 294 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 RPL5P24-201ENST00000463742 885 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 NDUFA5P9-201ENST00000472609 340 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC126121.1-201ENST00000482313 553 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC146944.2-203ENST00000502493 354 ntBASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SLC44A1Q8WWI5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms